Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0368 ATGATCATCGAATACTTCATTCCTTCTTCTACAGTAAGAATACCTAGCACCTACCTAAGCTTAGCCATGGCCTCCATTTTTCAATTTTGTAGCTTCTTGTTAATTTCTTTTACATGCGTGTTCATGTTCATGGGAGAGCCAGCAACAGCAGTGCAAATATTTCGACCTAGTCCATGGGCTCTTGCTCACGCCACATTTTATGGTGATGAGACTGCTTCTGCGACTATGGGAGGAGCATGTGGATATGGAAATTTGTTTCAGAATGGTTACGGGACAGATACAGTAGCATTGAGCTCAACGTTGTTCAACAATGGATATTCATGCGGGACATGTTACCAGATAAAATGTTACCAATCCGGTGCATGCTATAGAAATGTGCCCTTTGTCACAGTCACTGCCACCAACCTTTGTCCTCCTAATTGGTCTGAGGCTTCAGATAATGGTGGGTGGTGCAACCCTCCACGAGCACATTTTGACATGTCCAAACCCGTCTTCATGAAATTTGCTCAGTGGAAAGCAGGCATAGTCCCTGTTATGTACCGCAGAGTGCCATGTGGGAGGAAAGGAGGGATAAGATTTTCATTGCAAGGAAATGGGTACTGGCTATTGGTGTATGTTATGAATGTAGGAGGAGGAGGAGATATATCAAGCATGTTGGTTAAAGGAAGTAGAACAAATTGGATTAAAATGAGCCATAATTGGGGTGCATCTTATCAAGCATTTGCAACTCTTGGTGGCCAAACTCTTTCTTTCAGGATTACTTCATACACTAACAAGCAAACTATTTATGCTTGGAATGTTGCTCCTTCTAATTGGAACATCGGATTAACTTATTCAGCCAATGTCAACTTCCACTGA 858 0.4231 MIIEYFIPSSTVRIPSTYLSLAMASIFQFCSFLLISFTCVFMFMGEPATAVQIFRPSPWALAHATFYGDETASATMGGACGYGNLFQNGYGTDTVALSSTLFNNGYSCGTCYQIKCYQSGACYRNVPFVTVTATNLCPPNWSEASDNGGWCNPPRAHFDMSKPVFMKFAQWKAGIVPVMYRRVPCGRKGGIRFSLQGNGYWLLVYVMNVGGGGDISSMLVKGSRTNWIKMSHNWGASYQAFATLGGQTLSFRITSYTNKQTIYAWNVAPSNWNIGLTYSANVNFH* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0368 285 Pfam Expansin C-terminal domain 191 269 IPR007117 -
Lan6g0368 285 PRINTS Expansin/Lol pI family signature 58 73 IPR007118 GO:0005576
Lan6g0368 285 PRINTS Expansin/Lol pI family signature 76 94 IPR007118 GO:0005576
Lan6g0368 285 PRINTS Expansin/Lol pI family signature 98 116 IPR007118 GO:0005576
Lan6g0368 285 PRINTS Expansin/Lol pI family signature 173 189 IPR007118 GO:0005576
Lan6g0368 285 PRINTS Expansin/Lol pI family signature 227 241 IPR007118 GO:0005576
Lan6g0368 285 PRINTS Expansin/Lol pI family signature 266 280 IPR007118 GO:0005576
Lan6g0368 285 Pfam Lytic transglycolase 94 180 IPR009009 -
Lan6g0368 285 SMART dpbb_1 94 180 IPR007112 -
Lan6g0368 285 PANTHER EXPANSIN-A15 24 285 IPR002963 GO:0009664
Lan6g0368 285 PANTHER EXPANSIN 24 285 - -
Lan6g0368 285 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 200 280 IPR007117 -
Lan6g0368 285 Gene3D - 46 185 IPR036908 -
Lan6g0368 285 SUPERFAMILY Barwin-like endoglucanases 58 208 IPR036908 -
Lan6g0368 285 SUPERFAMILY PHL pollen allergen 187 279 IPR036749 -
Lan6g0368 285 PRINTS Expansin signature 89 103 IPR002963 GO:0009664
Lan6g0368 285 PRINTS Expansin signature 129 139 IPR002963 GO:0009664
Lan6g0368 285 PRINTS Expansin signature 148 165 IPR002963 GO:0009664
Lan6g0368 285 PRINTS Expansin signature 165 178 IPR002963 GO:0009664
Lan6g0368 285 PRINTS Expansin signature 189 201 IPR002963 GO:0009664
Lan6g0368 285 PRINTS Expansin signature 201 222 IPR002963 GO:0009664
Lan6g0368 285 PRINTS Expansin signature 266 282 IPR002963 GO:0009664
Lan6g0368 285 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 77 190 IPR007112 -
Lan6g0368 285 Gene3D - 186 285 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0368 Lan-Chr6 2854661 2857323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0368 23 285 Expansin Gene Family AT1G12560 65.019 3.65e-124 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0368 - - lang:109349912 607.446