LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan6g0366	ATGGCCACTTCCTCAGGTGGTAACAGTTACAGAAATGGCACACCCAGAAGCTCAAATCCGAAGCCACAGGTAAAGGCCAAATCTTTGCCTCCTTCTACCACCACCCATCGCCGGAATAGTGCCGCCAAGGACCACGCTGCTGTTCCTGGAAGAGTTAGAGTGGCAGTTAGATTGCGGCCCCGTAATGCAGAGGAATCAGTTGCAGATACTGATTTTGCTGACTGTGTGGAACTACAGCCAGAGCTCAAAAGATTAAAACTTCGAAAGAACAATTGGGATGGTGATACTTATCAGTTTGACGAGGTGCTCACTGAATTTGCATCGCAAAAACGTGTCTATGAAGTTGTGGCCAGGCCTGTTGTGGAGAGTGTACTGGATGGCTACAATGGGACAATTATGGCATATGGGCAGACAGGGACTGGTAAAACTTACACTGTTGGATGCCTTGGGGAGGAAGACACAGCTGCACGAGGAATAACGGTGCGGGCTATGGAGGATATTTTCGCCAATGTTTCATTTGAAACTGATTCAGTCTCAGTCTCTTATTTGCAGCTTTATATGGAGACTATACAAGATCTTCTGGAACCCACCAATGATAAAATAGCCATTGTAGAGGATCCCAAAACAGGTGATGTCTCACTACCTGGAGCTACCCTAGTTGAAATTAGAGACCAGCAGAGTTTTATACAACTACTAAGATTAGGAGAAGCTCAACGCTTTGCTGCAAATACAAAACTGAATACAGAATCTTCTCGAAGTCATGCTATTCTGATGGTGCATGTAAAGAGATCCATCAAGGGAAGAGATGCAGCTCTTTCAACTGAAAATGGCAATCACCAAGACATGGTTAAATCGTTAAAGCCGTCTGTTGTTCGGAAAGGCAAGTTGGTTGTTGTAGACCTTGCTGGTTCGGAGCGAATTAATAAGTCAGGATGTGAAGGGCATACATTAGAAGAGACCAAATTTATCAATCTGTCATTGAGTGCATTGGGGAAGTGTATTAATGCACTTGCTGAGAATAGTGTGCATGTGCCATTTCGTGACTCGAAGCTTACTAGATTGTTACGTGATTCATTTGGAGGTACAGCAAGAACTTCACTGGTCATTACTATTGGACCATCTCCCCGGCATAGGGGAGAGACAGCGAGTACAATAATGTTCGGACAGAGGGCTATGAAGGTGGAAAATATGGTAAAGTTGAAGGAGGAATTTGATTATAAAAGCTTATCTAGAAGGCTAGATATAGAGTTAGAGAAACTCATAATGGAACATGAAAGGCAGCAGAAGGCATTTGAGGATGAGATTGAAAGGTTAGCCACAGAAGCACAACATCGAATATCTGAGGCTGAAAAAAACTATGCAGATTCATTGGAGATTCCGAAGGTGTCTGCTAAGGAACTGAGTGATTTGAAAAAAGTGATTCAGAAAGAGACTGTTTTAAGAAAAGCTGCTGAAGGGGAAGTAAAGAATCTGCAAATTCAAATGGCTGAACTCAAAATGTCAGAGGCTTCAGGGAAGTCAGAGATCTTAAAACTTCATAAGATGTTGGATGGTGAGGCAAGTCAGAAAGAGAAACTAGAAGGAGAAATAGCAATATTACAAAGTCAATTGTTGAAGTCAAGTCTTGAAACCCATGAGACAAGACAAGAAGTTGGCAGAGCTGGATTTGAAAATGAAGTAGGTGGTCTTGATTCTCTCATTTCCCAAGTTAAAGTTCAACAGCGAGCTTCAGGAAATGGAGAGAAGCCCTCAATGGCCAAGCTCTTTGAACAAGTGGGGTTGCAAAAGATTTTGTCATTGCTTGAAGCCAAAGATGCTGATGTGCGAATTCATGCTGTAAAAGTTGTGGCAAATCTAGCTGCTGAAGAAACAAATCAGGGGAAGATAGTAGAAGCAGGTGGGCTCACATCCTTGCTTACACTGCTTAAGAGCTCACAAGATGAGACCATACATAGAGTTGCTGCAGGTGCAATTGCAAATTTGGCAATGAATGAAACCAACCAAGAACTCATTATGGCCCAAGGGGGCATAAGTTTGTTGTCAATGACAGCAACCAATGCTGATGATCCTCAAACCCTTCGAATGATTGCTGGAGCCATCGCTAATCTATGTGGCAATGATAAGCTACAAGCGAAACTAAGGAGCGAACATGGTATCCAGGCACTGCTGGGAATGGTCAGATGCAAACATCCTGATGTACATGCACAGGTTGCTCGTGGAATAGCAAACTTCGCGAAGTGTGAGTCGAGAGCATCTAGTCAAGGGACAAAGAGTGGAAGATCTTTCCTTATTGAGGATGGTGCCCTTGCATGGATTGTGCAAAATGCAAATAACGAATCCTCATCAATTAGGCGTCACATTGAGCTTGCACTATGTCACTTAGCACAACATGAAGTAAATGCAAGAGACATGATTACCGGTGGTGCATTATGGGAGCTAGTTCGTATTTCGCGAGATTGTTCAAGAGAAGATATAAAGACTCTTGCGCATCGAACACTAGTCTCCAGTCCCACATTCCAAACTGAAATGAGGCGATTGCGGATAAATTACTGA	2553	0.4313	MATSSGGNSYRNGTPRSSNPKPQVKAKSLPPSTTTHRRNSAAKDHAAVPGRVRVAVRLRPRNAEESVADTDFADCVELQPELKRLKLRKNNWDGDTYQFDEVLTEFASQKRVYEVVARPVVESVLDGYNGTIMAYGQTGTGKTYTVGCLGEEDTAARGITVRAMEDIFANVSFETDSVSVSYLQLYMETIQDLLEPTNDKIAIVEDPKTGDVSLPGATLVEIRDQQSFIQLLRLGEAQRFAANTKLNTESSRSHAILMVHVKRSIKGRDAALSTENGNHQDMVKSLKPSVVRKGKLVVVDLAGSERINKSGCEGHTLEETKFINLSLSALGKCINALAENSVHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETASTIMFGQRAMKVENMVKLKEEFDYKSLSRRLDIELEKLIMEHERQQKAFEDEIERLATEAQHRISEAEKNYADSLEIPKVSAKELSDLKKVIQKETVLRKAAEGEVKNLQIQMAELKMSEASGKSEILKLHKMLDGEASQKEKLEGEIAILQSQLLKSSLETHETRQEVGRAGFENEVGGLDSLISQVKVQQRASGNGEKPSMAKLFEQVGLQKILSLLEAKDADVRIHAVKVVANLAAEETNQGKIVEAGGLTSLLTLLKSSQDETIHRVAAGAIANLAMNETNQELIMAQGGISLLSMTATNADDPQTLRMIAGAIANLCGNDKLQAKLRSEHGIQALLGMVRCKHPDVHAQVARGIANFAKCESRASSQGTKSGRSFLIEDGALAWIVQNANNESSSIRRHIELALCHLAQHEVNARDMITGGALWELVRISRDCSREDIKTLAHRTLVSSPTFQTEMRRLRINY*	851

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan6g0366	850	CDD	KISc	51	392	-	-
Lan6g0366	850	Coils	Coil	421	452	-	-
Lan6g0366	850	MobiDBLite	consensus disorder prediction	1	47	-	-
Lan6g0366	850	MobiDBLite	consensus disorder prediction	1	37	-	-
Lan6g0366	850	Pfam	Kinesin motor domain	57	394	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Lan6g0366	850	Gene3D	-	421	835	IPR011989	-
Lan6g0366	850	Coils	Coil	516	543	-	-
Lan6g0366	850	ProSitePatterns	Kinesin motor domain signature.	294	305	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
Lan6g0366	850	PANTHER	KINESIN-RELATED	465	842	IPR027640	GO:0003777\|GO:0007018
Lan6g0366	850	PANTHER	KINESIN-RELATED	36	463	IPR027640	GO:0003777\|GO:0007018
Lan6g0366	850	ProSiteProfiles	Armadillo/plakoglobin ARM repeat profile.	592	634	IPR000225	GO:0005515
Lan6g0366	850	SMART	kinesin_4	49	402	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Lan6g0366	850	ProSiteProfiles	Kinesin motor domain profile.	51	394	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Lan6g0366	850	SMART	arm_5	664	705	IPR000225	GO:0005515
Lan6g0366	850	SMART	arm_5	706	746	IPR000225	GO:0005515
Lan6g0366	850	SMART	arm_5	622	663	IPR000225	GO:0005515
Lan6g0366	850	SMART	arm_5	582	621	IPR000225	GO:0005515
Lan6g0366	850	Pfam	Armadillo/beta-catenin-like repeat	629	662	IPR000225	GO:0005515
Lan6g0366	850	PRINTS	Kinesin heavy chain signature	127	148	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Lan6g0366	850	PRINTS	Kinesin heavy chain signature	295	313	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Lan6g0366	850	PRINTS	Kinesin heavy chain signature	344	365	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Lan6g0366	850	Gene3D	Kinesin motor domain	42	420	IPR036961	-
Lan6g0366	850	ProSiteProfiles	Armadillo/plakoglobin ARM repeat profile.	633	676	IPR000225	GO:0005515
Lan6g0366	850	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	51	430	IPR027417	-
Lan6g0366	850	PANTHER	KINESIN-LIKE PROTEIN KIN-UA	36	463	IPR033291	GO:0008017\|GO:0032886\|GO:0048364
Lan6g0366	850	PANTHER	KINESIN-LIKE PROTEIN KIN-UA	465	842	IPR033291	GO:0008017\|GO:0032886\|GO:0048364
Lan6g0366	850	Coils	Coil	474	501	-	-
Lan6g0366	850	SUPERFAMILY	ARM repeat	581	833	IPR016024	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan6g0366	Lan-Chr6	2836982	2844840	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan6g0366	50	406	Calmodulin-binding Proteins	AT5G65930	34.037	8.38e-45	173

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan6g0366	-		K10396	gmx:100804612	1384.78