Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0365 ATGGATCCAATTTCAGCACATGGACACTCTCTTCCCCCTCCTTTCCACACAACAAGAGATTTCAATATGCATCATCAGCAGCAGCAGCATCAGCATCAATTCCACGCTTTACAGCATCAAACAACAGAAGACTCTCAAAGCGGAAGCAGCGGTGGTGGCTTGAATCTCAAAAGAGAACGCGAAGAAAACAAGAACAACAGTGAAGGGAATGATCTCGGTGGTGAAACTGAGATGTCAAGAAGACCAAGAGGAAGACCTGCTGGATCCAAGAACAAACCAAAGCCACCAATCATCATCACACGTGACAGCGCAAATGCCCTAAAGACGCACGTGATGGAAGTTGCCGACGGTTGCGACATCGTGGAAAGTGTTTCCAACTTCGCTAGGCGTCGCCAAAGAGGTGTGTGCATCATGTCCGGCACCGGAACTGTTACTAATGTAACTCTTCGTCAACCAGCTTCTTCTGGTGCTGTTCTCACTCTTCATGGAAGGTTCGAGATCTTGTCCCTTGCTGGATCCTTTCTCCCACCACCTGCCCCACCCGCCACGTCTGGTTTGACTATTTATTTGGCGGGCGGGCAAGGGCAGGTTGTGGGAGGAAGTGTGGTGGGGACACTCTTGGCTTCAGGTCCTGTGGTTATTATTTCGGCTTTGTTTAGTAACGCTGCTTATGAGAGACTTCCTTTGGAAGAAGATGATCCTTCTTCGCTTCCACTGCAAGGTGGTGGTGGCGGTGGTGGCTCGATTGGATCCCCGACTGCTGGTGGTGGACTTGGTGGTCAACAACAGCATCAGCAGAATCAGCTTTTAGGAGATGCAACTACTCCACAATTTCATGGGTTGCCTCCTAATCTTCTCAACTCTATTCAGATGCCTTCAGAAACATTCTGGAATACAAGTCGCTCTCCATATTGA 915 0.4918 MDPISAHGHSLPPPFHTTRDFNMHHQQQQHQHQFHALQHQTTEDSQSGSSGGGLNLKREREENKNNSEGNDLGGETEMSRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVLTLHGRFEILSLAGSFLPPPAPPATSGLTIYLAGGQGQVVGGSVVGTLLASGPVVIISALFSNAAYERLPLEEDDPSSLPLQGGGGGGGSIGSPTAGGGLGGQQQHQQNQLLGDATTPQFHGLPPNLLNSIQMPSETFWNTSRSPY* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0365 304 MobiDBLite consensus disorder prediction 255 292 - -
Lan6g0365 304 ProSiteProfiles PPC domain profile profile. 104 240 IPR005175 -
Lan6g0365 304 Gene3D - 107 239 - -
Lan6g0365 304 MobiDBLite consensus disorder prediction 20 53 - -
Lan6g0365 304 MobiDBLite consensus disorder prediction 231 292 - -
Lan6g0365 304 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 220 IPR005175 -
Lan6g0365 304 CDD DUF296 108 191 IPR005175 -
Lan6g0365 304 MobiDBLite consensus disorder prediction 55 84 - -
Lan6g0365 304 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 304 - -
Lan6g0365 304 PIRSF ESCAROLA 17 304 IPR014476 GO:0003680
Lan6g0365 304 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 304 IPR014476 GO:0003680
Lan6g0365 304 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 235 - -
Lan6g0365 304 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0365 Lan-Chr6 2828579 2830298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0365 1 304 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 56.358 4.16e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0365 - - lang:109348923 480.33