Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0359 ATGGGAAGACAACCATGCTGTGATAAACTTGGAGTAAAGAAAGGTCCATGGACTGGTGAGGAAGACAAGAAACTCATCAACTTTATTCTAAGCAATGGACAGTGTTGTTGGAGAGCAGTGCCTAAGCTTGCTGGGTTGAAACGTTGTGGCAAAAGTTGTCGTCTTCGTTGGACTAATTATCTTAGGCCTGACTTGAAGAGAGGCCTTCTCACTGAAGCAGAAGAGCAACTTGTTATTGATCTTCATGCTCGTCTTGGCAATAGGTGGTCCAAGATTGCTGCACGGTTACCAGGAAGGACAGATAACGAGATTAAAAACCACTGGAACACCCATATCAAGAAAAAGCTCCTTAAGATGGGTATTGATCCCGTTACTCATGAACCTCTTAATAAACACGTTTCATCCCCTGAAGAAAAAGCTGGCAATGATGTGGTTCTCAACTCAGAGGATAATTCAAATTCAAGCACATCCCAAGCTGAAAACACTTCTTGTGGAGAGTCCCTTTTGTTGGATAGTATTTGCAGAGATGAATCATTAATCAATAGCTTATGGCTTGATGAAACTCTACTCGATGATGCATTATGGGACATAGCACCTAAAGCAGATAATGTTTATAATAACACTGACAAGGGCCTGCCACCTTGGGAGGATAATTATGCTTGGTTATTGGACTGTCAGGATTTCGGTATTCATGATTTTGGTATTAATTGCTTCAACGAAATTGAGTCAAATGCACTGCATCAAACTATGGGAGTGGAGGAAAATGGACATTAG 774 0.4121 MGRQPCCDKLGVKKGPWTGEEDKKLINFILSNGQCCWRAVPKLAGLKRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLNKHVSSPEEKAGNDVVLNSEDNSNSSTSQAENTSCGESLLLDSICRDESLINSLWLDETLLDDALWDIAPKADNVYNNTDKGLPPWEDNYAWLLDCQDFGIHDFGINCFNEIESNALHQTMGVEENGH* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0359 257 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lan6g0359 257 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Lan6g0359 257 CDD SANT 16 61 IPR001005 -
Lan6g0359 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lan6g0359 257 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lan6g0359 257 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lan6g0359 257 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 1 230 - -
Lan6g0359 257 Gene3D - 71 160 - -
Lan6g0359 257 Gene3D - 12 67 - -
Lan6g0359 257 MobiDBLite consensus disorder prediction 127 161 - -
Lan6g0359 257 CDD SANT 71 112 IPR001005 -
Lan6g0359 257 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lan6g0359 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lan6g0359 257 MobiDBLite consensus disorder prediction 145 161 - -
Lan6g0359 257 SMART sant 13 63 IPR001005 -
Lan6g0359 257 SMART sant 66 114 IPR001005 -
Lan6g0359 257 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0359 Lan-Chr6 2782983 2785375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0359 1 235 MYB Transcription Factor Family AT4G22680 58.647 4.97e-97 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan6g0359 Myb_DNA-binding 2.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0359 K09422 - gmx:100786965 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0437 17 3276228 3278380 Lan6g0359 6 2782983 2785375 LSH