Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0354 ATGGACCTGAAGTCCTCTCATGTTTCTTCTGTTCCTGCTGACCCTGTAATACCCAACAAGTCAAGACTAGGAATGCAATCTAGTTTGCTAACTTATTCCCAGCAAGATTTACCACTTTCCCCTGGGAAGTACTCAAGAACGAGTTCAAGGAAAAGTGCTGGGAGTCTCGATGATGTTCGATCCAATGGTTGGTTGGACGCAATGATAGCCTCTTCTCCTCCGAAGAAAAAGCCACTTAAAGGTTCAAATGCTCAGTTTGCTTCATTTGACTTTACTGATGAAGACAATAGCTCATCCATGGTTCATCATCCTTCAGCACTAGACTATTTTGATAAAATTATTGACCGTGCAAAGAATAAGAAGGTTGCAGTGTTTCTAGATTATGATGGCACTCTTTCGCCAATAGTAGATAACCCAGATTGTGCCTTTATGTCTGAAGATATGCGTGCCACTGTGAGAAGCGTAGCAAGCTATTTTCCCACGGCAATAATCAGTGGGAGAAGCCGTGGCAAGGTGTTTGATTTAGTTAAACTAAAGGATCTCTACTATGCTGGTAGTCATGGGATGGATATTATTTGTCCTTTTAGTCAGACTCTGTCCAATAACCATCCGAGTTGCGTCAAATCTACTGACAATCAGGGAAATGAGATAACTCTCTTTCAGCCTGCAATAGAATTTCTGCCTCTGATTGACGAGGTTTTTAGAACCCTTGTCGATATAACTAAAGATATAGAGGGTGTGAAAGTTGAAAATCACAAATTTTGCGTTTCTGTACATTATCGTAATGTAAAAGAAAATAATTGGACAACTATTGGACAAATTGTCCATGACGCCGTAAAAAAGTATCCCCGTTTACGTTCAACTCATGGACGTAAGGTTTTAGATATCCGTCCTGTGATTGACTGGAACAAAGGAAAAGCAGTTGAATTTTTACATGAATCTCTAGGGTTAAATGATCGAGATGATGTTTTTTCCATTTACATTGGAGATGATAAAACTGATGAAGATGCTTTCAAGGTGTTGCGGGAGAAAAATCGTGGTTATGGGATTTTGGTTTCGTCAGTGAAAAAAGAAAGCAACGCCTTCTTCTCACTCGAAGACCCCAATGAGGTCATGAAATTTCTCCAACTACTTGTGAACTGGAAGAGGCAAGGAGAAAGAAAGACATAA 1170 0.3991 MDLKSSHVSSVPADPVIPNKSRLGMQSSLLTYSQQDLPLSPGKYSRTSSRKSAGSLDDVRSNGWLDAMIASSPPKKKPLKGSNAQFASFDFTDEDNSSSMVHHPSALDYFDKIIDRAKNKKVAVFLDYDGTLSPIVDNPDCAFMSEDMRATVRSVASYFPTAIISGRSRGKVFDLVKLKDLYYAGSHGMDIICPFSQTLSNNHPSCVKSTDNQGNEITLFQPAIEFLPLIDEVFRTLVDITKDIEGVKVENHKFCVSVHYRNVKENNWTTIGQIVHDAVKKYPRLRSTHGRKVLDIRPVIDWNKGKAVEFLHESLGLNDRDDVFSIYIGDDKTDEDAFKVLREKNRGYGILVSSVKKESNAFFSLEDPNEVMKFLQLLVNWKRQGERKT* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0354 389 CDD HAD_TPP 123 373 - -
Lan6g0354 389 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 124 342 IPR006379 -
Lan6g0354 389 MobiDBLite consensus disorder prediction 1 20 - -
Lan6g0354 389 Gene3D - 235 389 IPR023214 -
Lan6g0354 389 Gene3D - 122 208 IPR023214 -
Lan6g0354 389 Pfam Trehalose-phosphatase 125 368 IPR003337 GO:0003824|GO:0005992
Lan6g0354 389 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 387 - -
Lan6g0354 389 SUPERFAMILY HAD-like 123 383 IPR036412 -
Lan6g0354 389 TIGRFAM T6PP: trehalose-phosphatase 120 379 IPR003337 GO:0003824|GO:0005992
Lan6g0354 389 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 387 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0354 Lan-Chr6 2732601 2740616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0354 118 378 Trehalose Biosynthesis Gene Families AT1G70290 23.843 3.02e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0354 K01087 - vvi:100254004 503.827