Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0348 ATGAGCACTGCGGAACTTCTCAGCATCGATCCTCACGAACTTAAGTTCGTTTTTGAGCTGAAGAAGCAGATCTCGTCTTCTCTTCAATTGTCAAATAACACTGACAATCATGTAGCTTTCAAGGTGAAAACAACCAATCCGAAGAAGTACTGTGTTCGTCCAAACACTGGAATTATCTTGCCTCGATCTACATGTGATGTTATGGTTACCATGCAAGCACAAAAGGAAGCTCCACCTGATTTGGTATGCAAGGATAAGTTTCTTCTGCAAAGTGTAAAAACACATGATGGAGCTACCACAAAGGATATTTCTGCAGAAATGTTCAACAAGGAACTAGGGCATGTGGTTGAGGAATCCAAGTTGAGAGTGGTCTACGTTGCTCCACCTCAACCACCATCTCCAGTTGCAGAAGGTTCTGAGGAAGGGTCATCACCAAGAGGTTCAGTTTCAGAAAATGGAAATGTCAATGGTGGTGACTCCACAACAGTAGCAAGAGCATTCACTGAACGACACGAGGCTCCAGAAAAATCTGCTGAGGTGAAAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATCCAACAAAATAACAAGCTCCATCAGGAACTGGATCTGCTGAGACGTGAAGGCAATAAAAAACGTGGGGGTGTCTCGATGATCTTTGTCATATTAATTGGCTTACTTGGCATAATTATGGGTTATCTCTTGAAGAAGACCTAA 726 0.4242 MSTAELLSIDPHELKFVFELKKQISSSLQLSNNTDNHVAFKVKTTNPKKYCVRPNTGIILPRSTCDVMVTMQAQKEAPPDLVCKDKFLLQSVKTHDGATTKDISAEMFNKELGHVVEESKLRVVYVAPPQPPSPVAEGSEEGSSPRGSVSENGNVNGGDSTTVARAFTERHEAPEKSAEVKALISRLTEEKNNAIQQNNKLHQELDLLRREGNKKRGGVSMIFVILIGLLGIIMGYLLKKT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0348 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Lan6g0348 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Lan6g0348 241 MobiDBLite consensus disorder prediction 127 161 - -
Lan6g0348 241 MobiDBLite consensus disorder prediction 143 161 - -
Lan6g0348 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Lan6g0348 241 Gene3D Immunoglobulins 1 130 IPR013783 -
Lan6g0348 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Lan6g0348 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Lan6g0348 241 Coils Coil 177 211 - -
Lan6g0348 241 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0348 Lan-Chr6 2697184 2701079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0348 - - lang:109333499 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0904 18 14314362 14317893 Lan6g0348 6 2697184 2701079 LSH
Lan6g0348 6 2697184 2701079 Lan6g0982 6 9217518 9222201 PCT
Lan6g0348 6 2697184 2701079 Lan17g0941 17 13027992 13032315 PCT