Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0338 ATGGTGAAAATAGCTTTTGGTACCTTTGATGACTCTTTTAGCGTTACATCTCTCAAGGCTTATCTAGCAGAGTTCCATGCCACTCTCATTTTCGTCTTTGCTGGTGTTGGGTCAGCCATTGCTTACAATGAGGTTACAAAAGATGCAGCTTTGGATCCAGCTGGTCTAGTAGCAGTAGCATTGGCACATGCATTTGCACTATTTGTTGGAGTCTCTATCGCAGCCAACATATCTGGTGGTCATTTGAACCCAGCTGTTACTTTTGGATTGGCTATTGGAGGAAACATTACTCTCCTCACTGGTCTCTTCTACTGGATTGCCCAATTGCTTGGTTCCATTGTTGCATCCCTTCTCCTCTCTTTTGTCACCTCTAAGAGTGTTCCAACCCATGGACTATCTTCTGGAGTGAACACATTTGGAGGTGTAGTGTTCGAAGTTATTATTACATTTGGATTAGTGTACACTGTGTATGCCACAGCAGCTGACCCTAAAAAGGGCTCATTGGGGACCATTGCACCCATTGCTATTGGGTTCGTTGTGGGTGCCAACATCTTAGCTGCAGGTCCATTCAGTGGCGGTTCAATGAACCCAGCTCGATCATTTGGCCCAGCTGTGGTTAGTGGAAACTTTGCTGAAAACTGGATCTATTGGGTTGGCCCATTGATTGGTGGAGGCTTAGCTGGGTTGATCTATGGTGACATATTCATTGGTTCCTATGCCCCTGCATCTGAAACATACCCTTAA 744 0.453 MVKIAFGTFDDSFSVTSLKAYLAEFHATLIFVFAGVGSAIAYNEVTKDAALDPAGLVAVALAHAFALFVGVSIAANISGGHLNPAVTFGLAIGGNITLLTGLFYWIAQLLGSIVASLLLSFVTSKSVPTHGLSSGVNTFGGVVFEVIITFGLVYTVYATAADPKKGSLGTIAPIAIGFVVGANILAAGPFSGGSMNPARSFGPAVVSGNFAENWIYWVGPLIGGGLAGLIYGDIFIGSYAPASETYP* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0338 247 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0338 247 Pfam Major intrinsic protein 14 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0338 247 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Lan6g0338 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0338 247 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0338 247 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0338 247 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0338 247 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0338 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0338 247 SUPERFAMILY Aquaporin-like 14 236 IPR023271 -
Lan6g0338 247 Gene3D Glycerol uptake facilitator protein. 2 240 IPR023271 -
Lan6g0338 247 PANTHER AQUAPORIN-8 1 244 IPR034294 -
Lan6g0338 247 PANTHER AQUAPORIN TIP2-2-RELATED 1 244 - -
Lan6g0338 247 TIGRFAM MIP: MIP family channel proteins 23 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0338 Lan-Chr6 2600682 2615936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0338 1 245 Major Intrinsic Protein MIP AT5G47450 79.675 5.62e-135 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0338 K09873 - gmx:100527333 415.616