Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0335 ATGGGCGCCTACAAGTATGTTTCTGAGCTCTGGCGCAAAAAGCAGTCCGATGTTATGCGATTCTTGCAGCGAGTAAGGTGCTGGGAGTACAGGCAGCAACCTTCCATTGTTCGTCTGACAAGGCCTACTCGCCCCGACAAAGCTCGTCGCTTGGGCTATAAGGCTAAGCAGGGTTATGTGGTTTACCGTGTGCGCGTTCGTAGAGGTGGCAGAAAGAGACCAGTTCCCAAAGGTATTGTCTACGGGAAACCCACAAATCAGGGAGTTACCCAGCTGAAGTTTCAGCGATCAAAGAGGTCAGTTGCTGAGGAGCGAGCTGGGAGGAAGCTCGGTGGACTTCGGGTCCTCAATTCATACTGGGTCAATGAGGATTCTACTTACAAATATTTTGAGATAATTCTGGTGGATGTTGCTCATGCTGCCATCAGAAATGATCCAAGAATCAACTGGCTTGTCAATCCAGTGCACAAACACAGGGAGCTGCGTGGTCTCACCTCTGCTGGTAAATCTAACAGGGGTTTACGAGGCAAAGGTCATCGGTACCACAAGAATCGTCCATCCCGCAGGGCTACCTGGAAGAGAAACAACACCCTCTCCCTTCGCCGTTATCGTTAA 615 0.5041 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHAAIRNDPRINWLVNPVHKHRELRGLTSAGKSNRGLRGKGHRYHKNRPSRRATWKRNNTLSLRRYR* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0335 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
Lan6g0335 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Lan6g0335 204 MobiDBLite consensus disorder prediction 173 189 - -
Lan6g0335 204 ProSitePatterns Ribosomal protein L15e signature. 46 69 IPR020925 GO:0003735|GO:0005840|GO:0006412
Lan6g0335 204 MobiDBLite consensus disorder prediction 163 189 - -
Lan6g0335 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Lan6g0335 204 Pfam Ribosomal L15 2 190 IPR000439 GO:0003735|GO:0005840|GO:0006412
Lan6g0335 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 - -
Lan6g0335 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0335 Lan-Chr6 2585643 2587803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0335 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 92.157 2.30e-127 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0335 K02877 - gmx:100306052 387.111