Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0324 ATGGAAAATAGAGACTGCTCTTGTTTTTCTCGGTCTATGTATGAATGCGGTAAAGTTTCTGCCATCCGTGATTTCCCAGAGGAATGTGGACCATTTGCTTTTCCAGGTGTTCATCCAGTAGTGAAGGCAGATATTGCTGATATTGGTTCTGCTAAAGGTACAATTGTTGAGGATAATTATGGTGGACATTCGGGGGATTATACTGTTAAAACTTCCAGGTGTGGAGATGATTCTCACCATTTTGAGTTAAAAAGAAATTTATTTCATACCGAGTTTCTTTACCAAACAACTGACTGTAGTTTGAAGAATGAAAATCCAATGGTCTCATCTCATCATGTGGATGGTCTTCCTTTAGCAAATTACACTCCTGCAAAAGTGGCGTCGGTTGCCATGGAAGCTTTAGAGGATACATGGTTGACAGGAATTGCGAACTCTGTAAAATGTGAGTCCTCTATGCCAAAGTCATCATCTCCAGTTGGTGAGGTGGCTTTGTCAAGTGGTTCAAAATCCATATGCAATGTCAGTGTATCCGGTTCCAGTGCTTGTATTGAGAAGGCTATAACTAGAAGGTATGTTCCTCAAGAAAAACTTGCAGCTGTCAGAGACTTTCCTCCTTTTTGTGGACGCAATGCTCCAAGTCTCAGTAAGGATGAGTGTCTAAAGAAGTTTTCTTTGAATAACAAGAGAGTGGGTCAACACAACTCGGCTGTAAATGACAATCCATTGAGGGAAAAAGTGATCACTGTTATGAAGGAGGTGGAAAATCATACTCAAGATGAATATGCATGCAAGAGAAAGCTTGTGAATATAGTTGAAGCTGATCCTGAAAGGAATGCTACAAAGAAAGTGAAGAAGATTGATGTATTTGAACCTTCTGGGATGAATTTGACTCGGGAAAACAAGAGAGAAAGGTTCCTCACACTTCCTCAAGAAAGTAATCATCATCCAGTTGAAATTGGCACAAGAAAGAAAGTTGGTTTTTTTGCATGCCTTGACAGGTCTGTAGCTGCTATCAAGAGAAAAGATGCACCAAATCTTTATAGGCATAAGCCTTTGAAAAAGAAATTTGAAAGTGCTACTTCTGATGAGATGGGTCAGTTAGTAGGTTGGGATAAGGATTCTCTTGACCCTAATGAAAACATCAAAGACTTCCGAGTTGTCCCAAAATCACATGGTTTCAACAACAGTGTAAATGTTGGTGACTCAAATGGGGTCCGAAATAAAGTGAGGGAGACATTAAGCATGTTCCAAGCACTTTGTAGAAAACTTTTGCAGGAAGTAGAAGGTAAATCAAATGAGCGAGCAAATAGTCGTAGGAGGGTAGATTTGGAAGCGGCAAAGATCCTGAAGGGGAAAGGGAAGTATGTTAACCCAGGCAAACAAATCTTGGGATCTGTCCCCGGGATCGAAGTTGGTGATAAATTCCAATATAGGGCGGAGCTTAATATGATTGGCCTTCATCGCCCAAGTCAAGGTGGTATAGATTATGTGAAGCACAATGGCAAGGTCCTTGCAACTAGTATTGTTGCATCAGGGGGCTATGCTGATGAGGTGGATAATTCAGATGTCTTGATATATACAGGGCAGGGTGGAAATATGATGAGCCCTGATAAAGAACCTGAAGATCAGAAGCTTGAGCGTGGAAATCTTGCTTTGAAGAATAGCTGTGAGGTAAAGAATCCTGTTAGGGTGATACATGGCTATGAATTGATGGATGGAAAGTCCAAGGCATTGGTTTATGATGGACAATATCTGGTTGAATCATATTGGCAGGAGATGGGGTCACATGGAAAACTGATCTATAAGTTTCAGATGCGTAGAATCCCAGGTCAACCTGAGCTTGCTTTCAAGAAACCCAAGAAATCTAGGATGTTGTTTTGA 1881 0.4083 MENRDCSCFSRSMYECGKVSAIRDFPEECGPFAFPGVHPVVKADIADIGSAKGTIVEDNYGGHSGDYTVKTSRCGDDSHHFELKRNLFHTEFLYQTTDCSLKNENPMVSSHHVDGLPLANYTPAKVASVAMEALEDTWLTGIANSVKCESSMPKSSSPVGEVALSSGSKSICNVSVSGSSACIEKAITRRYVPQEKLAAVRDFPPFCGRNAPSLSKDECLKKFSLNNKRVGQHNSAVNDNPLREKVITVMKEVENHTQDEYACKRKLVNIVEADPERNATKKVKKIDVFEPSGMNLTRENKRERFLTLPQESNHHPVEIGTRKKVGFFACLDRSVAAIKRKDAPNLYRHKPLKKKFESATSDEMGQLVGWDKDSLDPNENIKDFRVVPKSHGFNNSVNVGDSNGVRNKVRETLSMFQALCRKLLQEVEGKSNERANSRRRVDLEAAKILKGKGKYVNPGKQILGSVPGIEVGDKFQYRAELNMIGLHRPSQGGIDYVKHNGKVLATSIVASGGYADEVDNSDVLIYTGQGGNMMSPDKEPEDQKLERGNLALKNSCEVKNPVRVIHGYELMDGKSKALVYDGQYLVESYWQEMGSHGKLIYKFQMRRIPGQPELAFKKPKKSRMLF* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0324 626 Gene3D - 445 625 IPR036987 -
Lan6g0324 626 SMART G9a_1 459 611 IPR003105 -
Lan6g0324 626 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 253 623 - -
Lan6g0324 626 Coils Coil 420 440 - -
Lan6g0324 626 Pfam SAD/SRA domain 463 611 IPR003105 -
Lan6g0324 626 SUPERFAMILY PUA domain-like 445 618 IPR015947 -
Lan6g0324 626 ProSiteProfiles YDG domain profile. 464 607 IPR003105 -
Lan6g0324 626 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 253 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0324 Lan-Chr6 2503832 2508120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0324 388 612 Su(var)3-9 homologs AT5G04940 42.174 1.31e-43 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0324 K11420 - lang:109348878 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0403 17 2988343 2994387 Lan6g0324 6 2503832 2508120 LSH
Lan18g0925 18 14500158 14507064 Lan6g0324 6 2503832 2508120 LSH