Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0322 ATGAAGCCACAGAATATGAAACCTTTGAACTTATTCTCTCAACAACTTTCTTGTCTTCCAAGCTTGGTAAATTCCAGTTTAATTAAGCCTGCAACTGGAAGTAGTGCACAAATGACAATTTTTTATGGTGGGGAAGTTATTGTATTTGATGATTGTCCAGCTGAAAAAGCCAAGGAGATAATGTCTTTTGCCACCAAGGGAAACTCACAAATCCAGAACAATAACAACAACAATAACTATGCTTACACATTTACTCAGACTCACCCTACTTCAAGTGCCAACAATTTTGTTCAAGAGCACAACCCTCAAGCACCACCAAGATATGTTGCTTGTGATCTACCACTTACTAGGAAAGCATCATTGTATCGGTTCATGGAGAAAAGGAAGGATAGAATTAATGGCAGAAAACCATATCAAAAAAGCAATCCCATAACAGACCCTTATAAGCCAGATGAATCCATGTCATGGCTAACCTTGTCACCTCACTCTCCACAAGACAGATCTGAGAGTTGCTCTAGTTTTGTGTAA 528 0.3864 MKPQNMKPLNLFSQQLSCLPSLVNSSLIKPATGSSAQMTIFYGGEVIVFDDCPAEKAKEIMSFATKGNSQIQNNNNNNNYAYTFTQTHPTSSANNFVQEHNPQAPPRYVACDLPLTRKASLYRFMEKRKDRINGRKPYQKSNPITDPYKPDESMSWLTLSPHSPQDRSESCSSFV* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0322 175 MobiDBLite consensus disorder prediction 132 175 - -
Lan6g0322 175 PANTHER PROTEIN TIFY 10A 3 160 - -
Lan6g0322 175 Pfam Jas motif 114 139 IPR018467 -
Lan6g0322 175 ProSiteProfiles Tify domain profile. 31 66 IPR010399 -
Lan6g0322 175 MobiDBLite consensus disorder prediction 156 175 - -
Lan6g0322 175 Pfam tify domain 34 64 IPR010399 -
Lan6g0322 175 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 3 160 IPR040390 -
Lan6g0322 175 SMART tify_2 31 66 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0322 Lan-Chr6 2495558 2496836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0322 4 160 Tify Gene Family AT1G19180 37.143 1.20e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan6g0322 tify 2.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0322 K13464 - gmx:100306332 166.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0399 17 2960501 2961724 Lan6g0322 6 2495558 2496836 LSH