Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0307 ATGGGAGGGGTATCACTGCCTCCAGGTTTTCGTTTCCATCCAACCGATGAAGAACTTGTTGGATATTACTTAAAAAGAAAAGTTGAAGCGCTTGAAATTGAGCTTGAAGTGATTCCTGTGATTGACTTGTACAAATTCGATCCATGGGATTTGCCGGAGAAATCGTTCCTACCAAATAGAGACTTGGAGTGGTTTTTCTTTTGTCCACGGGATTGCAAGTACCCAAATGGATCAAGAACAAATAGAGCTACTAAAGCTGGCTACTGGAAAGCCACTGGAAAAGGCAAGAAGGTTGTATGTCAGTTTAGTCCATCCGCATCCACTGTCACTGGTTACCGCAAGACCCTTGTTTTCTATCGTGGAAGGGCACCTTTAGGAGATCGAACCAATTGGGTTATGCATGAGTACCGCCTCTGCGATGATCTTGTCCAACCCTCACCATCTTTTCGGGGTGCTTTTGCTTTGTGCCGAGTTATTAAGAAGAATGAGAAGGCCAATGATTTCAAGGCAGAAGTACACAATGGTAAAAGGGCTGCGGGGAGCAGTTCCTGCAATGGGAATGACACCTCAATGAGAGTAACTTTCTCCAATGAGCTCTTAAGTATCTCCTGCGACATTTCCTCGCAAGCAAGTCAGATGTGCAATGAGAGTAGTTATTCGAGCCCTATTGCTTCTCCTTGTCCATACAATGTGACTCCAATGCCCTCCATGGCTACCAATCCTTCAGACTTCTGTATCTCCCCTGATATGATTCTTGACTCTTCAAAGGAATACTGTCAAGAACATGATGTTGTGTCTGGATACTTTCCACACCATGGCTTAAGCAAAATGACGCCATGGCAGTCATTCAATTATACAGATATTTCATCCAGTTCATCCTACTCAAATTGCAATGGGGGAATTGAATTTTCTGATGATATCAGTCGAATAGGGTGCATCCGTGCATGTCACCTCACTCACGACAAGGAAACCTCATGGACACTTTATGGAAATGAGGATGTGCCTTATGAAGGTTATGATCAATTCAATGGTTGTGATGAAGGGGCTGCTAGATGGGATCTCTGA 1065 0.4394 MGGVSLPPGFRFHPTDEELVGYYLKRKVEALEIELEVIPVIDLYKFDPWDLPEKSFLPNRDLEWFFFCPRDCKYPNGSRTNRATKAGYWKATGKGKKVVCQFSPSASTVTGYRKTLVFYRGRAPLGDRTNWVMHEYRLCDDLVQPSPSFRGAFALCRVIKKNEKANDFKAEVHNGKRAAGSSSCNGNDTSMRVTFSNELLSISCDISSQASQMCNESSYSSPIASPCPYNVTPMPSMATNPSDFCISPDMILDSSKEYCQEHDVVSGYFPHHGLSKMTPWQSFNYTDISSSSSYSNCNGGIEFSDDISRIGCIRACHLTHDKETSWTLYGNEDVPYEGYDQFNGCDEGAARWDL* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0307 354 Gene3D NAC domain 15 166 IPR036093 GO:0003677|GO:0006355
Lan6g0307 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 344 - -
Lan6g0307 354 SUPERFAMILY NAC domain 3 161 IPR036093 GO:0003677|GO:0006355
Lan6g0307 354 Pfam No apical meristem (NAM) protein 7 138 IPR003441 GO:0003677|GO:0006355
Lan6g0307 354 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 344 - -
Lan6g0307 354 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0307 Lan-Chr6 2336415 2339114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0307 1 304 NAC Transcription Factor Family AT4G17980 54.019 9.11e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan6g0307 NAM 2.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0307 - - adu:107487585 490.73