Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0294 ATGTCTCGGTTCATTTTCAATCTATTACACCTGTTACTCATGTTTTTACTACTGTGCTCAAATCCTTTACTTCAAGTGGTGTCGGTGTCTCTCGCTAGAGACTTCCAAATTCTGCTGCAAGTCAAGACCACACAGCTTGATGATAAAAACAACAGCCTCAAAGATTGGGTCCCAAACAGAGACCACAATCCTTGCAACTTCACTGGCATTACCTGTGATGCACGAAACAAATCAGTTATCTCCATTAACCTCTCTGAGATCGGTGTTTATGGTAATTTCCCCTTTGGGTTCTGTCACATCCATACCCTCCAAAACCTTTCTCTTGCATCAAATTTTCTTGGCAATGCTATCTACCCACACTCACTGCTTCTCTGTTCCCACCTTCATCTCTTGAACCTCTCTAATAACTACTTCGTCGGTTCCTTGCCGGAATTTTCACCGGAATTTGATCAGCTGAGAGTACTTGACCTCTCAAATAATAACTTCACCGGTGACATTCCGGGAAATTATGGTAACCTTCCACAACTAGAGGTTCTCATTTTATCTGGTAACTTAATCACTGGAACGATTCCTTCATTCTTAGGCAAACTCAATGCATTAACTCAATTGGAACTAGCTTTTAATCCATTAAAGCCAGGACCTTTACCTTCCCAACTTGGAAATCTTTCAAATCTTGAAGTTCTTTATCTCGCCAAATTGAACTTCATAGGGGACATACCAGACTCCATTGGGAACCTTGTTTCGCTCAAGCACTTGGATTTGTCTCAAAACTCTTTGTCAGGTAAAATCCCAAACAACATTTCTGGTTTGATAAAGTTGAAGCAACTTTATCTATTTGAAAATCAACTTTCTGGTGAATTGCCACAAGGTTTAGGAAACCTCAGCAATTTAATTGACTTAGACATCTCTCAGAACTTTTTAACCGGAAAATTACCAGACACAGTCGCTTCATTGCATCTTTTTTCTCTTAGTTTAAACGACAATCTTCTCGAAGGAGAAATCCCTGAAAGTTTAGCTTCGAACCCGAATTTACAGCATCTGAAACTCTTCAACAACAGCTTTGATGGGAAGTTACCTCAGATTCTGGGGGAAAACTCTGATTTAGAGGATTTTGATGTATCAACTAATCATTTGAGTGGTGAATTGCCTAAGTATCTTTGTCAAAGGAACAAGCTTCAGCGTCTAATCATATTCGATAATCGATTCTCTGGAACTCTGCCTGATCAATATGGACATTGTGATTCCCTTGGATATGTTAGAATCAAGAACAACCAACTTTCTGGGCACGTGCCACCAAAGTTTTGGAGCCTTCCAAAACTTGGTTTTCTTGAAATGGATAACAACAGGTTCCAAGGTTCCATTTCTGAATCCATATCTAATTCCAAGGGACTTTCAACACTTACTTTATACGGTAACAGCTTTTCTGGTCAATTCCCAACGGGAATTTGTGAGCTTGATCAGCTATTGAAAATTGACATAAGCAAGAACATGTTCAATCGTGAAGCTCCCTCGTGCCTAACTCGGTTGAAAAAGTTACAGAACCTTCGTATGCAAGAAAACATGTTCACTGGTGAGATTCCTAGCAATGTGAGTTCATGGACTGAGTTAACAGAGTTGAACTTGTCATATAACCAATTCCACGGTTCGATCCCACCAGAACTTGGTGATTTGCCACAGCTAATGTACCTTGACCTCGCCATGAATTCTCTCACGAGGGAGATTCCGGTAGAGTTGACGAGTCTGACGCTGAACCAGTTCAATGTCTCTGGTAACAAGTTGAAAGGGGAGGTTCCTTCAGGTTTCAACCATGAAGTGTACTTATCAGGTTTAACGGGTAACCCGGGTCTGTGTAGCCCAGTTATCAAAACCCTCCCTTCTTGTTCCAAACACAGACCCTTTTCTCTCATTGCTATAATCCTTTTGGCTGCTTGTGTTGTTCTCCTCCTCCTAGTGTCCCTGTTATGGTTCCTGAAGAAAAGGTCACTTCCTAAGCAGTCATTTAAGGTAACAACTTTCCAAATGGTTGGGTTCAATGAAGAAGACCTAGTCCCATTCTTAACCAGCGAGAACATAATTGGCACAGGGAATTCAGGTCGGGTATACCGGGTGGATCTAAAAGTGGGGCAGACAGTGGCCGTTAAGAAACTCTGGGGAGGAACACAAGGACCAGACATGGAATCGGTGTTCAGGTCGGAGACTGAGACATTGGGTAGAATTCGGCATGCTAATATTGTGAAACTGTTGTTTAGTTGCAGTGCTGATGACTTCAGGATTTTGGTATATGAGTACATAGATAATGGAAGCTTAGGTGATGTTTTGCATGAACAAAAATATGGCCAGTTTTTGGATTGGTCTAAGAGGTTCAACATTGCTGTAGGTGCAGCACAGGGGTTGGCTTACCTACACCATGATTGTGTGCCTGCTATTATTCATAGGGATGTGAAAAGTAATAACATATTGCTGGATCTTGAATTTAAGCCTCGTCTAGCAGACTTTGGGTTGGCTAAGATATTGCAGCATGAGCATAGTGAAAGAGTATGTGCCATGTCCAGGGTTGCTGGATCATATGGTTACATTGCTCCAGAGTATGCTTATACATTGAAAGTGACTGAGAAAGGTGATGTTTATAGTTTTGGTGTAGTGCTGATGGAATTGATCACAGGCAAGAGGCCAAGTGACCCTTCCTTTGGTGAGAACAAGGATATAGTGAAGTGGGTTACTGAGACAGCTATATCTTGTTCTGAAGAAGAAAGTGGCAATATTGGAGGTCACCGTTTTAATTTGTCCAACATAGTAGACCCAAGATTGAACCTGGAAACCAGTGATTATGATGAGGTTGAGAAAGTTCTAACTGGGGCTCTACTTTGCACCTCAGTGTTTCCCCTTAAGAGACCCTCAATGAAAAAGGTGGTTGAATTGCTCAAGGGCCATAGTGATAGGCACCAGTGCACCACATCAAAGTGA 2964 0.4163 MSRFIFNLLHLLLMFLLLCSNPLLQVVSVSLARDFQILLQVKTTQLDDKNNSLKDWVPNRDHNPCNFTGITCDARNKSVISINLSEIGVYGNFPFGFCHIHTLQNLSLASNFLGNAIYPHSLLLCSHLHLLNLSNNYFVGSLPEFSPEFDQLRVLDLSNNNFTGDIPGNYGNLPQLEVLILSGNLITGTIPSFLGKLNALTQLELAFNPLKPGPLPSQLGNLSNLEVLYLAKLNFIGDIPDSIGNLVSLKHLDLSQNSLSGKIPNNISGLIKLKQLYLFENQLSGELPQGLGNLSNLIDLDISQNFLTGKLPDTVASLHLFSLSLNDNLLEGEIPESLASNPNLQHLKLFNNSFDGKLPQILGENSDLEDFDVSTNHLSGELPKYLCQRNKLQRLIIFDNRFSGTLPDQYGHCDSLGYVRIKNNQLSGHVPPKFWSLPKLGFLEMDNNRFQGSISESISNSKGLSTLTLYGNSFSGQFPTGICELDQLLKIDISKNMFNREAPSCLTRLKKLQNLRMQENMFTGEIPSNVSSWTELTELNLSYNQFHGSIPPELGDLPQLMYLDLAMNSLTREIPVELTSLTLNQFNVSGNKLKGEVPSGFNHEVYLSGLTGNPGLCSPVIKTLPSCSKHRPFSLIAIILLAACVVLLLLVSLLWFLKKRSLPKQSFKVTTFQMVGFNEEDLVPFLTSENIIGTGNSGRVYRVDLKVGQTVAVKKLWGGTQGPDMESVFRSETETLGRIRHANIVKLLFSCSADDFRILVYEYIDNGSLGDVLHEQKYGQFLDWSKRFNIAVGAAQGLAYLHHDCVPAIIHRDVKSNNILLDLEFKPRLADFGLAKILQHEHSERVCAMSRVAGSYGYIAPEYAYTLKVTEKGDVYSFGVVLMELITGKRPSDPSFGENKDIVKWVTETAISCSEEESGNIGGHRFNLSNIVDPRLNLETSDYDEVEKVLTGALLCTSVFPLKRPSMKKVVELLKGHSDRHQCTTSK* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0294 987 SMART serkin_6 686 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0294 987 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 979 - -
Lan6g0294 987 SUPERFAMILY L domain-like 318 629 - -
Lan6g0294 987 Pfam Protein kinase domain 688 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0294 987 ProSiteProfiles Protein kinase domain profile. 686 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0294 987 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 12 979 - -
Lan6g0294 987 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Lan6g0294 987 Gene3D Ribonuclease Inhibitor 117 212 IPR032675 -
Lan6g0294 987 Gene3D Phosphorylase Kinase; domain 1 680 763 - -
Lan6g0294 987 SUPERFAMILY Protein kinase-like (PK-like) 686 974 IPR011009 -
Lan6g0294 987 SUPERFAMILY RNI-like 78 385 - -
Lan6g0294 987 Gene3D Ribonuclease Inhibitor 320 632 IPR032675 -
Lan6g0294 987 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Lan6g0294 987 Pfam Leucine rich repeat 223 283 IPR001611 GO:0005515
Lan6g0294 987 Pfam Leucine rich repeat 151 210 IPR001611 GO:0005515
Lan6g0294 987 SMART LRR_typ_2 173 197 IPR003591 -
Lan6g0294 987 SMART LRR_typ_2 270 294 IPR003591 -
Lan6g0294 987 SMART LRR_typ_2 246 269 IPR003591 -
Lan6g0294 987 SMART LRR_typ_2 557 581 IPR003591 -
Lan6g0294 987 SMART LRR_typ_2 437 461 IPR003591 -
Lan6g0294 987 Gene3D Transferase(Phosphotransferase) domain 1 764 987 - -
Lan6g0294 987 Gene3D Ribonuclease Inhibitor 33 116 IPR032675 -
Lan6g0294 987 Gene3D Ribonuclease Inhibitor 213 319 IPR032675 -
Lan6g0294 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0294 Lan-Chr6 2257154 2260532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0294 29 975 Receptor kinase-like Gene Family AT5G65710 55.258 0.0 1019
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan6g0294 Pkinase 4.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0294 - - gmx:100813889 1341.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0367 17 2702696 2706860 Lan6g0294 6 2257154 2260532 LSH