Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0285 ATGCCGTCAGCTCTTTCAGCAAATGATCCTTTGCTTGCAAACCCTTTCTCTGATGGATTCAACGGCAGTTTCAAGCCATGGGACTGCCCTGATATTTTTCTAGCCAAATCCACAAGTCCCAAACCGGTTACTTCAGGCACCGGCTCTGATATCCTTGAACAAACCCATAGCAAAGAAAAACAGGGATCAGAAGACTCGAACCGTGGCGTGACCATTGTGGAGGAGCGTCAGCGGAGGCGAATTATATCGAACCGGGAATCGGCCCGGAGGTCACGCATGCGTAAACAGAGGCATCTAGAGAACTTTCGTAACCAGTTGAACTTGTTTAGGGTCCAAAACCGGGAATTGAAAACCCGGTTGCAGTTCCTGATGAACCACTATATCCGCGTCCGAACCGAAAACGATCGGCTCCGGTCCGAACGAACCCTGCTCGGTCAAAAACTGTCAAACGTAAACCAATTTATGGTTTTCCAACAAGTTCAACCCTTGTCCTCTGCGTGGTAA 504 0.4901 MPSALSANDPLLANPFSDGFNGSFKPWDCPDIFLAKSTSPKPVTSGTGSDILEQTHSKEKQGSEDSNRGVTIVEERQRRRIISNRESARRSRMRKQRHLENFRNQLNLFRVQNRELKTRLQFLMNHYIRVRTENDRLRSERTLLGQKLSNVNQFMVFQQVQPLSSAW* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0285 167 Gene3D - 74 128 - -
Lan6g0285 167 CDD bZIP_plant_GBF1 77 127 IPR045314 GO:0003700|GO:0006355
Lan6g0285 167 Pfam bZIP transcription factor 76 134 IPR004827 GO:0003700|GO:0006355
Lan6g0285 167 MobiDBLite consensus disorder prediction 38 73 - -
Lan6g0285 167 Coils Coil 99 119 - -
Lan6g0285 167 PANTHER BZIP TRANSCRIPTION FACTOR 25 167 - -
Lan6g0285 167 SMART brlzneu 71 136 IPR004827 GO:0003700|GO:0006355
Lan6g0285 167 MobiDBLite consensus disorder prediction 53 73 - -
Lan6g0285 167 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 137 IPR004827 GO:0003700|GO:0006355
Lan6g0285 167 SUPERFAMILY Leucine zipper domain 76 128 IPR046347 GO:0003700|GO:0006355
Lan6g0285 167 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Lan6g0285 167 PANTHER BZIP TRANSCRIPTION FACTOR 44 25 167 - -
Lan6g0285 167 MobiDBLite consensus disorder prediction 38 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0285 Lan-Chr6 2159769 2160686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0285 3 160 bZIP Transcription Factor Family AT3G49760 36.875 9.86e-28 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan6g0285 bZIP_1 7.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0285 - - lang:109332688 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0359 17 2618279 2619096 Lan6g0285 6 2159769 2160686 LSH
Lan18g0965 18 14813316 14814230 Lan6g0285 6 2159769 2160686 LSH
Lan6g0285 6 2159769 2160686 Lan6g1465 6 21438643 21463106 PCT
Lan6g1465 6 21438643 21463106 Lan6g0285 6 2159769 2160686 PCT