Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0273 ATGTCTGTTCCAATGGCGGCTTCATTATCGAATTCTCTCATATCCCTTCCAAACCCTCCCAATAACCTACGTTGCCATTCTTGTCACCGTTTCTATTTCCACTCACAATCACAATCCACTCTCAAACTAAAATCCCTTTCCCCAAATCCATTGTCTCTGGCAATTGATCGAAAGAAGGGATTTTCAACTAAGTGCAATGTATTCAGCGAAGGGAGCGTGGATGAGGAGAGCTATAATTCGGTGGAGGATAAGCAATTTGTGCGTTGGTTTCGTGAAGCGTGGCCTTACTTATGGGCATATCGTGGTGGCACTTTTGTTGTCATTATTTCCGGTGAAGTTGTTGCTAGTCCTTCATTAGATCCCATTCTCAAGGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATGTGCAAATAGACAAGCTTGTGAATGAGAGAGGGAGCCAGCCTAAGTATGTTGGTAGATATAGAATAACCGATGATGAATCTCTAGCTGCTGCAATGGAAGCTGCTGGGGGGATAAGATTGATGATTGAAGCAAAGCTTTCTCCTGGACCCTCCACATGCAATATGCGTCGACATGGTGACAATAGCCGTTGGCACGAAGTCGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCTGCCAAGAGAAGAGGGGTTGTCAATGGAATTGATTTTGGTTCAACCGGGGAGGTTAAAAAAGTAGATGCATCTCGAATGCGTGAGAGGCTTGATGGTGGTTGTGTAGTTATTTTAAGCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACATATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCCGACAAGTTAATATGTATTATAGATGGCCCAATACTTGATGAGAGTGGACGCCTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACACGTTAATCCGTAAACGAGCTGCACAAAGTGAAATAGCTGCTAACTATGTGAAAGCCGTTGATGAAGAAGTTCTCAACTCTCATGAGCATAACCATTTTAATGGGACAGTCCAATCTCCATCCAATGGAAAACCTTCTTCAGAATGGAATAATGTAACCTTTCATAATGGCATTGGTTTTGACAATGGAAATGGCCTAGGGTCTGGTGAGCAAGGATTCGCTATTGGAGGTCAAGAGAGGCTAAGTAGAATGAATGGTTATCTGTCAGAATTGGCAGCTGCAGCCTTTGTTTGTAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGACGGCACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGAATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGACAGCACAGGTAAAAGATATTTCTGGAATAAAACAACTTATGCAGCCTTTGGAGGCATATGGCATATTGGTTAAGCGGACTGATGAAGAGCTACTAAAATCATTGGATAACTTCCTTGTTGTGGAAAGAGAAGGCCAAGTAATTGCTTGTGCTGCTCTTTTTCCTTTTTTTGAGGAGAAGTGCGGAGAGGTTGCTGCTATTGCAGTATCTCCTGATTGTCGTGGTCAAGGACAGGGAGACAAGTTGCTTGATTATATAGAGAATAAAGCATCATCTCTTGGATTAAATATGCTTTTCCTGCTTACTACTCGCACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGCTCAATTGACTGTATTCCTGAAAAGAGGAGGAGAATGATCAATCTGTCCCGCAATTCTAAATATTATATGAAGAGGCTTCTACCAAATAGAAGTGGAATTACTGTTGGTAGAAAAATTATTTCAAATTAG 1845 0.4249 MSVPMAASLSNSLISLPNPPNNLRCHSCHRFYFHSQSQSTLKLKSLSPNPLSLAIDRKKGFSTKCNVFSEGSVDEESYNSVEDKQFVRWFREAWPYLWAYRGGTFVVIISGEVVASPSLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLVNERGSQPKYVGRYRITDDESLAAAMEAAGGIRLMIEAKLSPGPSTCNMRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDASRMRERLDGGCVVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGRLIRFLPLQEADTLIRKRAAQSEIAANYVKAVDEEVLNSHEHNHFNGTVQSPSNGKPSSEWNNVTFHNGIGFDNGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAQVKDISGIKQLMQPLEAYGILVKRTDEELLKSLDNFLVVEREGQVIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIENKASSLGLNMLFLLTTRTADWFVRRGFSECSIDCIPEKRRRMINLSRNSKYYMKRLLPNRSGITVGRKIISN* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0273 614 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 452 600 IPR000182 GO:0016407
Lan6g0273 614 PANTHER AMINO-ACID ACETYLTRANSFERASE 63 605 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lan6g0273 614 Hamap Amino-acid acetyltransferase [argA]. 85 598 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lan6g0273 614 Gene3D - 84 451 IPR036393 -
Lan6g0273 614 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 455 601 IPR016181 -
Lan6g0273 614 Gene3D - 452 598 - -
Lan6g0273 614 SUPERFAMILY Carbamate kinase-like 84 322 IPR036393 -
Lan6g0273 614 CDD AAK_NAGS-ABP 85 446 IPR033719 -
Lan6g0273 614 Pfam Amino acid kinase family 105 324 IPR001048 -
Lan6g0273 614 CDD NAT_SF 493 555 - -
Lan6g0273 614 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 407 598 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lan6g0273 614 SUPERFAMILY Carbamate kinase-like 400 448 IPR036393 -
Lan6g0273 614 Pfam Acetyltransferase (GNAT) family 492 557 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0273 Lan-Chr6 2094121 2099650 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lan6g0273 AA_kinase 6.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0273 K14682 - gmx:100777694 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0354 17 2560166 2567711 Lan6g0273 6 2094121 2099650 LSH
Lan18g0970 18 14847844 14855893 Lan6g0273 6 2094121 2099650 LSH