Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0269 ATGGATACCTTGTTTAGGCTTGTCAGTTTTCAATATCAACATCAACAACAAACCGATAATCAATCTCTGAACTCCACCACAAGCAGAACCACAACATCTAGTAGTTCTAGATCCTCTAGACAACAACAACACCACCAAAACTATCACTTCCAACAAGATCAAGACGAAGAATGCTTCAACTTTTTCATGGATGATGAAGACCTTTCCTCGTCTTCTTCTAAGCACTACTATCCTTACCAACCCCACCACCACCCTCCTTCTACCACCACCACACTCACCCCAACCCCTGATAACTTCTCCTTCTCACCCTCCCGCACTGACTTCAATTTCGAATTCTCGGGAAAGTGGGCCAACGACATTCTCCTTGAAACGGCACGTGCCATTGCTGAGAATAACAGCGCACGTGTCCAACAACTCATGTGGATGCTCAATGAACTAAGCTCCCCTTATGGTGATACAGATCAGAAACTTGCTTCCTATTTCCTACAAGCTTTGTTCAGTCGCATGACCGAAGCGGGAGACAGAACCTACCGCACTTTAACATCTGCATCGGAGAGAACATGTTCATTTGAATCAACAAGAAAAACCGTTTTGAAGTTCCAAGAAGTTAGTCCTTGGACAACCTTTGGACACGTTGCGTGCAATGGCGCAATCTTAGAAGCCTTAGAAGGAGAGCCAAAGTTGCACATAATTGATATTAGTAACACCTATTGCACCCAATGGCCTACTCTCTTTGAAGCATTGGCCACTCGAAATGATGATACTCCGTACCTTCGTTTAACAACGGTTGTTACTACCAGGCTCGGTGGCTCCATCGCGGCTGTGCAAAGGGTCATGAAGGAAATAGGCACTAGGATGGAGAAATTCGCGAGACTCATGGGTGTTCCTTTTAAATTCAACGTGATTCATCATGCTGGTGATCTTTCTACTTTGGATTTGAGTGATTTGAATATTAAGGATGATGAAGCGTTGGCGATTAACTGCGTTAACGCTTTGCATTCGATCACAGGCGTTGGTGACGCACGTGACGTGTTGATATCTTCGTTGAGGAGGTTACAACCGAGGATAATCACGGTAGTGGAAGAGGAAGCTGATTTGGACGTTGGATTCGATGGATTTGAATTTGTGAAGGGTTTTCAAGAATGCCTGAGATGGTTTAGGGTTTACTTTGAAGCTTTAGATGAGAGCTTTCCGAGGACGAGCAACGAGCGTTTGATGCTCGAACGTGAGGCAGGGAGAGCGGTGTTTGACTTGGTGGCTTGTTCTCCGTCGGAGTCGGTGGAACGTCGTGAGACGGCGGCGCGGTGGTCGCAGCGTCTGCATGGGGGCGCATTAAATACGGTGCCGTTTAGTGATGAGGTTTGCGATGACGTGAGAGCGTTGTTGAGGAGGTATAAGGAAGGATGGTCAATGACACAGTGCTCCGACGCCGGAATATTCTTGTCTTGGAAGGAGCAGGTGGTGGTGTGGGCCAGTACATGGAGGCCTTGA 1491 0.4695 MDTLFRLVSFQYQHQQQTDNQSLNSTTSRTTTSSSSRSSRQQQHHQNYHFQQDQDEECFNFFMDDEDLSSSSSKHYYPYQPHHHPPSTTTTLTPTPDNFSFSPSRTDFNFEFSGKWANDILLETARAIAENNSARVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRMTEAGDRTYRTLTSASERTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEALEGEPKLHIIDISNTYCTQWPTLFEALATRNDDTPYLRLTTVVTTRLGGSIAAVQRVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSTLDLSDLNIKDDEALAINCVNALHSITGVGDARDVLISSLRRLQPRIITVVEEEADLDVGFDGFEFVKGFQECLRWFRVYFEALDESFPRTSNERLMLEREAGRAVFDLVACSPSESVERRETAARWSQRLHGGALNTVPFSDEVCDDVRALLRRYKEGWSMTQCSDAGIFLSWKEQVVVWASTWRP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0269 496 Pfam GRAS domain family 119 495 IPR005202 -
Lan6g0269 496 PANTHER PROTEIN SHORT-ROOT 1 495 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Lan6g0269 496 MobiDBLite consensus disorder prediction 72 94 - -
Lan6g0269 496 MobiDBLite consensus disorder prediction 14 48 - -
Lan6g0269 496 ProSiteProfiles GRAS family profile. 108 495 IPR005202 -
Lan6g0269 496 MobiDBLite consensus disorder prediction 14 50 - -
Lan6g0269 496 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 495 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0269 Lan-Chr6 2062810 2077233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0269 1 496 GRAS Transcription Factor Family AT4G37650 60.374 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan6g0269 GRAS 3.4e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0269 - - jre:108988543 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0349 17 2534072 2536163 Lan6g0269 6 2062810 2077233 LSH