Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0265 ATGAAAGCCTTCACCTTCTTTATTATCATCCTTATCACTATTACCACATCGTCTCTATCATTCGCAAAAGGAGTCAACACTATTCAATTCCAATTCCACTCCTTAAATTCAAATAACTCAAGCAATGAATCTCACTCTAGAAGAATTCTCCACCAACCATTGTTCCCTGAGAGTTCTGTTCCACCACCATCAACCACCGAGTCACCGCCGACGGAAACAGAGACTCCTCCTTCTCCTGACGGTAACATTCCATTCTTCTACGAGAATCCACCGGGACCACCGCCACCTCAATTAGAACCAATAACTTCTAACGCTACACTCTCGAATTCGAACCCAACGCAACCTAACAAGGGAACGAAGAAAGTTGCGATTGCGATCTCGGTTGGAATTGTGACTCTTGGAATGTTAACTGCACTGGCGTTCTTCTTGTACAAGCACAAAGCTAAACACCAAGGGGAAACTCAGAAGCTCGTGGCTCGGGACCCGAACCCGAACCTGGAGGATACGAGGGCCCCACCATCGTCTAGTATTCTCTACATTGGAACAGTTGAGCCAACGAGAACGGAGTCGAATAGGTCGCCGTATCAGAAGCTCAATTCTGTTAAGCGATCGGAACGGTACCGTCCAAGTCCTGAATTGCATCCACTGCCGCCGTTGAGAAAGCCTCATTCCGATGGGAATTACCCGCCTGCGGCGTCTCCGTCATCTTCTGATGAGGAAAGTCACGCCACGACGGCGTTTCATTCGCCGCAAAACTCGTCGGTGAGTTACGATGAAGGGTATTACACGCCGGTTTCACGTCAGAGTTCTCTCGTTAAAAGTAGCCCCACCGCTGCCGCTGCCGCACCACCACCACCTCCTCCGGTTCCGTTCTCGAAGAGAACTTCCCCGAAGTCTCGAGTTTCGGTTTCCTCGCCGGATATTAGGCATATCATAATTCCATCTATAAAGCAGGCTCCGCTGCCGCCGTCTCCGGCACCAGCACCACCTGATAAACAAGTGAATTCAGGAAGTTCTAGAAGACCAAAGTTTTCAGCACCTCCCCCAGCTCCGAATTTAACGCATCTTCGATCACCAATCAACAAAGCCACGAAGGTTTCTAGGACTGTACTCAATGCTCCTCCTCCTCCTCCACCTCCTCCACCTCCTCCGCCTCCTCCGCCTCCTCCGCCACCGAGAAAAAAAGAGTCTCCAATAGTTAGTGTTTCATCGACACGTGAATCAAGAAATGAGAAATCTTTCAGTCCAAGTGAAGGAGGTGATAGCAGTGTAAAAAAAGGCCCACCTTCAGAGAATGTTGATAATAAAAGTGTGAATGGTGGTGTAAGGTTTTCTGAGGAGAGGGTAGAAGAGAATGAGAAACCAAAGTTGAAAGCTTTACATTGGGACAAAGTTCGAGCAACCTCTGACCGTGATACTGTGTGGGACCACCTCAAATCTAGCACATTTCCATTAAATGAGGGCATGATGGAGTCCTTATTTGGCTGCAATGCCACAACTTCTGTACCTAAAGAACCTCCAAGAAAGTCAGTTATCCCTTCCATTGATAAGGAGAAGAGGGTTTTAGACCCCAAGAAGTCTCAAAACATAGCTATACTAATAAGGGCACTCAATGTCACAAGAGATGAGGTGTCAGAAGCTCTTTTAGATGGGAATCCGGAAGGTTTGGGTGCTGAACTATTGGAAACCCTAGTAAAGATGGCTCCTACAAAAGAGGAAGAGATAAAACTTAAAAACTATGATGGTGACCTATCAAAACTTGGATCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCATTTAAAAGAGTTGAAGCTATGCTGTATAGGGCCAACTTTGATGCAGAAGTTAACTACCTTAGAAAGTCTTTTCAAACCTTAGAGGCAGCAAGTGAGGAATTAAGGAACAGCCGATTATTCTTCAAACTCCTTGAAGCTGTTCTAATGACAGGAAACAGAATGAACATTGGCACCAATCGAGGTGATGCTAAAGCATTCAAACTGGACACACTCTTAAAACTCGTAGATATAAAAGGAGCAGATGGAAAGACTACATTGCTCCACTTTGTGGTCCAAGAGATTATTAGATCTGAAGGTGCAGGTGGTGAATCTGAAAATGGGAATGTCAAGGGCCAAATGAGTTCCAATTTTAACGAGGATGAGTTTAAGAAGCAAGGATTGCAGGTTGTGGCTGGACTCGGTAGAGACCTTAGTAATGTAAAAAAAGCAGCAGCAATGGACTCAGATGTCTTGAGCAGTTACCTTTCAAAGCTTGAAACGGGGCTCGATAAAGTACGATTGGTTCTGCAATACGAGAAGCCAGATGTGCAAGGGAATTTCTTCAAATCCACAAAGCTATTCCTGAGAGATGCCGAAGATGAAATTGTTAGGATTAAGGCTGATGAGAGAAATACCTTATTTCTTGTGAAAGAAGTTACACAATACTTTCACGGTGATACAACAAAGGAAGAAGCTCACCCTTTCAGAATTTTTATGATTGTAAGAGACTTTCTAAATATTCTGGATCAGGTGTGCAAAGAAGTGGGAAAGATGCAGATGCATGATAGAATTGTTGGTGGTTCTTCCCGATCCTTCCGCATAGCTGCAAGTGCATCATTGCCTGTTCTCAACAGGTACAATCCAAGACAGGATAGAAGCTCTGATGAGGAAAGCTCATCTCCTTAG 2694 0.4499 MKAFTFFIIILITITTSSLSFAKGVNTIQFQFHSLNSNNSSNESHSRRILHQPLFPESSVPPPSTTESPPTETETPPSPDGNIPFFYENPPGPPPPQLEPITSNATLSNSNPTQPNKGTKKVAIAISVGIVTLGMLTALAFFLYKHKAKHQGETQKLVARDPNPNLEDTRAPPSSSILYIGTVEPTRTESNRSPYQKLNSVKRSERYRPSPELHPLPPLRKPHSDGNYPPAASPSSSDEESHATTAFHSPQNSSVSYDEGYYTPVSRQSSLVKSSPTAAAAAPPPPPPVPFSKRTSPKSRVSVSSPDIRHIIIPSIKQAPLPPSPAPAPPDKQVNSGSSRRPKFSAPPPAPNLTHLRSPINKATKVSRTVLNAPPPPPPPPPPPPPPPPPPPRKKESPIVSVSSTRESRNEKSFSPSEGGDSSVKKGPPSENVDNKSVNGGVRFSEERVEENEKPKLKALHWDKVRATSDRDTVWDHLKSSTFPLNEGMMESLFGCNATTSVPKEPPRKSVIPSIDKEKRVLDPKKSQNIAILIRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDAEVNYLRKSFQTLEAASEELRNSRLFFKLLEAVLMTGNRMNIGTNRGDAKAFKLDTLLKLVDIKGADGKTTLLHFVVQEIIRSEGAGGESENGNVKGQMSSNFNEDEFKKQGLQVVAGLGRDLSNVKKAAAMDSDVLSSYLSKLETGLDKVRLVLQYEKPDVQGNFFKSTKLFLRDAEDEIVRIKADERNTLFLVKEVTQYFHGDTTKEEAHPFRIFMIVRDFLNILDQVCKEVGKMQMHDRIVGGSSRSFRIAASASLPVLNRYNPRQDRSSDEESSSP* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0265 897 MobiDBLite consensus disorder prediction 154 454 - -
Lan6g0265 897 ProSiteProfiles Formin homology-2 (FH2) domain profile. 447 872 IPR015425 -
Lan6g0265 897 PANTHER FORMIN-RELATED 6 897 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lan6g0265 897 MobiDBLite consensus disorder prediction 279 293 - -
Lan6g0265 897 MobiDBLite consensus disorder prediction 101 118 - -
Lan6g0265 897 Pfam Formin Homology 2 Domain 450 844 IPR015425 -
Lan6g0265 897 PANTHER FORMIN-LIKE PROTEIN 6 897 - -
Lan6g0265 897 SMART it6_source 447 859 IPR015425 -
Lan6g0265 897 MobiDBLite consensus disorder prediction 229 276 - -
Lan6g0265 897 Gene3D Formin, FH2 domain 443 855 IPR042201 -
Lan6g0265 897 SUPERFAMILY Formin homology 2 domain (FH2 domain) 460 858 - -
Lan6g0265 897 MobiDBLite consensus disorder prediction 398 420 - -
Lan6g0265 897 MobiDBLite consensus disorder prediction 56 100 - -
Lan6g0265 897 MobiDBLite consensus disorder prediction 371 396 - -
Lan6g0265 897 PRINTS Vinculin signature 370 380 - -
Lan6g0265 897 PRINTS Vinculin signature 385 398 - -
Lan6g0265 897 PRINTS Vinculin signature 510 531 - -
Lan6g0265 897 MobiDBLite consensus disorder prediction 168 198 - -
Lan6g0265 897 MobiDBLite consensus disorder prediction 53 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0265 Lan-Chr6 2034579 2039326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0265 454 887 FH2 protein (formin) Gene Family AT5G67470 72.414 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0265 - - gmx:100798670 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0344 17 2501240 2505746 Lan6g0265 6 2034579 2039326 LSH
Lan18g0258 18 3543376 3547814 Lan6g0265 6 2034579 2039326 LSH
Lan6g0265 6 2034579 2039326 Lan18g0258 18 3543376 3547814 PCT
Lan18g0258 18 3543376 3547814 Lan6g0265 6 2034579 2039326 PCT