Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0262 ATGAGTTTGGATAGCGTAGTTGTGAGAGAGTTCAACCCCAATAAAGACAGAAGGAGAGTTGAAGAGGTTGAAAGAATATGCGAAGTTGGACCCAGTGGCAAGCTTTCTCTCTTCACCGATCTCCTAGGTGACCCTATTTGCAGGGTTCGCCACTCACCTGCTTTTCTCATGCTGGTGGCTGAGATAGGTGATGAAATAATAGGAATGATAAGAGGCTGCATCAAAACTGTGACATGTGGAAAGAAACTCTCAAGAAATGGAAAGTACAAGCACTTCACTACAACTACCAATAATAACAACAATTGCAATGACACTATCCAATCTACTACTCCCAAACACGTACCCGTGTACACCAAAGTCGCCTACATATTAGGCTTGCGCGTTTCACCTTCTCACAGGAGAATGGGAGTAGGGTTGAAACTAGTGCAAAGAATGGAGTCATGGTTCAAAGATAATGGAGTTGAGTACTCGTACATGGCAACCGAAAACGACAACATAGCTTCCGTGAAGCTCTTTACTCATAACTGTGGTTACTCTAGGTTTCGTACACCTTCCATACTTGTGAACCCAGTTTTTGCTCACAGAGCTCACGTGTCACCGAAAGTTACCATCATCAAACTCACCCCAAATGACGCTGAATCACTTTACCGAAGTCGATTTTCTACCACTGAGTTTTTCCCTCGCGACATAGACTCAATCCTCAATAATAAACTTTCTCTTGGAACTTTCCTTGCTGTGCCACATGGCTCTTATACACAAGACACTTGGCTTGGTTCAAGTTTTTTCCTCTCCCACGCGCCTAAGTCGTGGGCCCTACTCAGTGTTTGGAACTGCAAAGATGTTTTCACGCTCGAAGTTCGCGGCGCGTCACGAACAAAGCGTGCCCTCGCAAGAACGACAAGATTGCTGGACAGGACTTTACCGTTTCTTCAGTTACCGTCGATTCCAGATTTTTTTAAACCCTTTGGGTTTCACTTTTTGTACGGGTTGGGTGGTGAAGGACCTAAAGCGGTGAAGATGGTGAAGGCGTTATGTGGGTTCGCGCACAATTTGGCTAAGGAACATGGTTGTGGTGTGGTAGCTACTGAAGTATCTTGTCGTGAACCGTTGAGGTTTGGGATACCACACTGGAAGATGCTATCGTGCGCAGATGATTTATGGTGTATAAAGAGGCTTGGGGAAGATTACAGTGATGGTTCTATTGGTGACTGGACAAAATCTCCACCTGGAATTTCCATTTTTGTTGACCCTAGAGATTTCTAA 1263 0.4481 MSLDSVVVREFNPNKDRRRVEEVERICEVGPSGKLSLFTDLLGDPICRVRHSPAFLMLVAEIGDEIIGMIRGCIKTVTCGKKLSRNGKYKHFTTTTNNNNNCNDTIQSTTPKHVPVYTKVAYILGLRVSPSHRRMGVGLKLVQRMESWFKDNGVEYSYMATENDNIASVKLFTHNCGYSRFRTPSILVNPVFAHRAHVSPKVTIIKLTPNDAESLYRSRFSTTEFFPRDIDSILNNKLSLGTFLAVPHGSYTQDTWLGSSFFLSHAPKSWALLSVWNCKDVFTLEVRGASRTKRALARTTRLLDRTLPFLQLPSIPDFFKPFGFHFLYGLGGEGPKAVKMVKALCGFAHNLAKEHGCGVVATEVSCREPLRFGIPHWKMLSCADDLWCIKRLGEDYSDGSIGDWTKSPPGISIFVDPRDF* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0262 420 PANTHER N-ACETYLTRANSFERASE 6 420 - -
Lan6g0262 420 CDD NAT_SF 57 156 - -
Lan6g0262 420 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 46 178 IPR016181 -
Lan6g0262 420 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 6 420 - -
Lan6g0262 420 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 205 IPR000182 GO:0016407
Lan6g0262 420 Pfam Acetyltransferase (GNAT) family 50 178 IPR000182 GO:0016407
Lan6g0262 420 Gene3D - 38 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0262 Lan-Chr6 1959586 1961767 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lan6g0262 Acetyltransf_1 1.4e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0262 - - lang:109348839 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1302 17 21291718 21293692 Lan6g0262 6 1959586 1961767 LSH
Lan6g0262 6 1959586 1961767 Lan17g1302 17 21291718 21293692 PCT
Lan17g1302 17 21291718 21293692 Lan6g0262 6 1959586 1961767 PCT