Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0261 ATGAGTTGCAACGGGTGCAGAGTCCTTCGAAAGGGTTGCAGTGAGTCTTGTATTTTACGCCCTTGTCTACAATTTATCGACACTCCTGAAGCCCAAGGCTATGCCACTGTCTTCGTAGCCAAATTTTTTGGCCGTGCTGGTCTCATGTCTTTCATTTCCAATGTCCCCGTAACCCAACGACCTGCTTTGTTTCAATCTCTCTTGTTCGAAGCTTGTGGACGAACGGTTAACCCTGTCAACGGTGCCGTTGGGCTTCTCTGGACTGGAAATTGGCACGTGTGCCAGTCGGCGGTTGAGACGGTGCTCCGTGGTGGTACCCTACGGCCCATGCCGGAGCTTCTCGCTCTTGATGCGCCCACTCACGTCGCCGATGATGCATCGGAAGGTGAAGTTACTTGCACCGACATGTGGAGGCTACGAGATCCGAACCCGAATTTCCGGTTCACCAGTTCGCGGTCTAAAGTTTCTTCTGGCGTAAAACGCAAGCGATCGGAGGAAATTGCCGATCTTGATCTCCGATTAACGCCAAGTTTTGTGCAGAATTCGCCGGCGTACAGTTGCCGACGAGATATTCGCCGTCCTGGTACGCCGTCGATGAATTCAGAGGAATCCGTCACAACTACGGCGTGCTTGGATAGTGGGCTCGTAGATCGTTACGCTCAGGGCAGAGACAGAAAAGTCCTCAACCTTTTCATTTGA 699 0.5222 MSCNGCRVLRKGCSESCILRPCLQFIDTPEAQGYATVFVAKFFGRAGLMSFISNVPVTQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQSAVETVLRGGTLRPMPELLALDAPTHVADDASEGEVTCTDMWRLRDPNPNFRFTSSRSKVSSGVKRKRSEEIADLDLRLTPSFVQNSPAYSCRRDIRRPGTPSMNSEESVTTTACLDSGLVDRYAQGRDRKVLNLFI* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0261 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 232 - -
Lan6g0261 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 232 - -
Lan6g0261 232 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Lan6g0261 232 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0261 Lan-Chr6 1942198 1943327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0261 1 232 AS2 family AT4G37540 55.777 6.54e-83 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan6g0261 LOB 6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0261 - - lang:109332579 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0252 18 3246132 3247587 Lan6g0261 6 1942198 1943327 LSH
Lan6g0261 6 1942198 1943327 Lan8g0527 8 7510423 7511874 PCT
Lan18g0252 18 3246132 3247587 Lan6g0261 6 1942198 1943327 PCT