Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0251 ATGTTGGAGCTGTGTAGAAGGCCATTTGAGACGTGCTTTGGTGGTGGAGGAGGAAGCAAGGATAGTCTATTATGGCACGAGGATTTGGAGCCACATGCTTCAGGGGAATATTCAATTGCAGTGGTACAAGCTAATTCGTTATTGGAGGATCAAGGACAAGTTTTTAACACTCCCTCCGCAACTTTCATTGGAGTTTACGATGGTCATGGTGGACCTGAAGCTTCCCGTTTCATCACTAAACATCTCTTTTCCTTCCTTCATAAGTTTATTTCAGAGGAAGGAGAGATTTCTGAGGAAGTGATAATGAAGGCTTTCAATGCAACGGAAGAGGAATTCTGGCATTTAGTGAAGCAATCTTGGATTACTCTGCCACATATTGCTGTAGTGGGTTCATGTTGTCTTCTTGGGGTGATTTCAAATAATAATCTTTATGTTGCAAATCTTGGGGATTCAAGAGCAGTGCTGGGTAGGAAAGCATTAAGGAGTCAAGTAAATTGTGCTGCTGTAGTGGCAGAGCGTTTGTCCACTGATCATAATGTTGGAGTGGAAGAGATCAGAAAGGAGGTTGAGGCTCTTCACCCAGATGATGCACACATTGTGGTTCACACTCGTGGAGTTTGGCGAATCAAGGGTATTATTCAGGTCTCAAGATCGATTGGTGATGTTTATCTAAAGAAACCAGAGTTTGACAAAAATCCTCTATTCCAACAATTTGTATGTCCAGTACCTTTAAAGAGGCCTGTAATTACAACACAACCGTCAATATTGACAAGGAAGTTGACAGCAGAGGATTTGTTTCTGATCTTTGCATCAGATGGACTTTGGGAGCATTTAACTGATGAAGCTGCTGTTGAAATCGTCTTCAGAAGTCCAAGAAAAGGAATAGCAAAACGATTGGTGAGAGCTGCATTGGAAGAGGCTGCAAAGAAAAAAGAAATGAGATATGCAGATTTAAAGAGAATTGAAAAAGGTGTAAGGCGAAAGTTCCATGATGATATTACAGTGATCGTTATATACCTAGAGCATTCACAAGGTTCTCTGAGTCGTAGGCCAAAACATCAGGGTGGTTGCATTAGTACTCCTGTAGATATTTTCTCTCTGAATGCAGATGAAACTGACCTATAA 1125 0.4116 MLELCRRPFETCFGGGGGSKDSLLWHEDLEPHASGEYSIAVVQANSLLEDQGQVFNTPSATFIGVYDGHGGPEASRFITKHLFSFLHKFISEEGEISEEVIMKAFNATEEEFWHLVKQSWITLPHIAVVGSCCLLGVISNNNLYVANLGDSRAVLGRKALRSQVNCAAVVAERLSTDHNVGVEEIRKEVEALHPDDAHIVVHTRGVWRIKGIIQVSRSIGDVYLKKPEFDKNPLFQQFVCPVPLKRPVITTQPSILTRKLTAEDLFLIFASDGLWEHLTDEAAVEIVFRSPRKGIAKRLVRAALEEAAKKKEMRYADLKRIEKGVRRKFHDDITVIVIYLEHSQGSLSRRPKHQGGCISTPVDIFSLNADETDL* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0251 374 Gene3D - 26 347 IPR036457 -
Lan6g0251 374 CDD PP2Cc 43 340 IPR001932 -
Lan6g0251 374 SUPERFAMILY PP2C-like 44 341 IPR036457 -
Lan6g0251 374 SMART PP2C_4 26 338 IPR001932 -
Lan6g0251 374 Coils Coil 301 321 - -
Lan6g0251 374 PANTHER ALPHABET, ISOFORM E-RELATED 3 373 - -
Lan6g0251 374 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Lan6g0251 374 Pfam Protein phosphatase 2C 58 310 IPR001932 -
Lan6g0251 374 ProSiteProfiles PPM-type phosphatase domain profile. 36 340 IPR001932 -
Lan6g0251 374 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0251 Lan-Chr6 1880039 1882276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0251 18 364 PP2C-type Phosphatase Gene Family AT3G51370 53.501 4.33e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0251 - K01102 gmx:100802394 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0251 6 1880039 1882276 Lan8g0522 8 7473338 7475918 PCT
Lan6g0251 6 1880039 1882276 Lan20g0399 20 2774307 2777060 PCT
Lan6g0251 6 1880039 1882276 Lan4g1501 4 24153147 24155842 PCT