Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0248 ATGAAAGTGTGTGTGTCAGTAACAAAAAAGAAGAAGATGAAGTTATGTACTACTAACTTGTTGATTTCCACTCTCTCCTTCTGTCTTCTTGCTTCTGCTACTCTGCCCCCAAATGAAGCTTGGGGGCTTACAAGTTTCAAAGAAGGTATATATGAAGACCCATACCTAGTTTTTTCAAATTGGAACTCTTTGGATTCAGATCCTTGTGATTGGTTTGGTGTCTCATGCACTATGGCTGCTGATCATGTCCTCAAGCTAAACATCTCAGGGTTATCTTTAAGAGGATTTCTTGTACAACAATTGGGGCAAATCACTTACTTGCAAGAATTAATTTTACACGGTAACAATCTCATTGGCACAATACCTAAAGAGTTGGGCATGCTGAAATCTCTCAAGGTGTTGGACTTGGGAAAGAATCAGTTATCAGGACCAATTCCTCCAGAGATTGGAAATATAACCCTACTTGTGAACATAAACCTGCAGTCCAATGGGTTGACTGGTAGGCTACCTGGAGAGCTTGGAAATTTGAGATACCTTCAAGAACTTCGGTTGGATAGGAATAGGCTTCAAGGATCTGTTCCCGCGAGTAGCGGTTCAAATTTTGATTCAAACATGCATGAGATGTATGCCTCAAAAGCGAACTTGACTGGGTTCTGTCGTTCGTCTCAGTTAAAAGTTGCAGACTTTTCATATAACTTTTTAGTTGGCGACATTCCCAAATGCTTGGAGTATCTTCCAAGGTCAAGCTTTCAAGGGAACTGCCTCCAGAGTAAGGAGTTGAAGCAGCGCCCTTCTATACAATGTGCTGGTGCTTCACCTGCCAAGAGCCAGCCAGTGGTCAACCCAAACCACCATCCTGCTCAATATGTGTCAAAGCATCACGTAACTTCAAAACCAGTATGGCTTTTTACTCTAGAAATAGTATCAGGAGCCATGGTTGGTTCTCTCTTTCTGGTTGCACTTCTCACTGCTTGTCAGAAGTGTAACAAAAAAGCATCAATCATTATTCCTTGGAAAAAGTCTCCAAGCCAGAAAGACCATACTGCAGTTTATATAGACCCTGAGATGTTGAAGGGTGTGAGAAGTTATAGCAGACAAGAGCTTGAAGTGGCATGTGAAGATTTCAGCAACATAATTGGGTCCTCACCAGACAGTGTGGTTTACAAGGGAAACATGAAAGGTGGGCCTGAGATTGCTGTCATTTCTGTCAGCATCAAGGAAGAGCGTTGGACAGGATATCTTGAACTTTATTTTCAGAGAGAGGTAGCAGACTTGGCAAGGCTAAATCATGAAAATACAGGAAAACTATTGGGCTATTGTAGAGAGAGCATTCCATTCACAAGGATGTTGGTGTTTGAGTATGCTTCAAATGGGACACTTTATGACCACCTACATTGTTATGAAGAAGGATGTCAGTTCTCTTGGACAAGGCGTATGAAAATTGTTATAGGCATTGCACGTGGACTCAGGTATTTGCACACAGAAATTGAGCCTCCATTCACTATTTCAGAGCTGAACTCTAGTGCTGTATACCTTACAGAAGAATTTTTCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGTCTATCCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTGGCAGTCAAGGTGCTGTCTGTGTTCTTCCAAATTCCCTTGAGGCACGACGTCTTGATACCAAAGGGAACATATATGCTTTTGGGGTGCTTCTACTGGAGATTATCAGTGGCAGACCTCCATACTGTAAAGAGAAAGGGTACTTGGTGGATTGGGCCAGAGAATATCTTGAAATGCCTGAAGTGATGTCTTATGTGGTAGATCCTGAATTGAAACATTTTAGATATGATGACCTCAAAGTGATATGTGAGGTAATAACTCTTTGTATCAACCCTGATACCACTGCACGCCCATCCACGCGAGAATTATGCAGCATGCTGGAGAGCAGAATTGACACTTCTATAAGCATGGAGCTCAACTCATCATCTTTAGCTTGGGCTGAACTTGCACTTTTGTCATAA 2019 0.417 MKVCVSVTKKKKMKLCTTNLLISTLSFCLLASATLPPNEAWGLTSFKEGIYEDPYLVFSNWNSLDSDPCDWFGVSCTMAADHVLKLNISGLSLRGFLVQQLGQITYLQELILHGNNLIGTIPKELGMLKSLKVLDLGKNQLSGPIPPEIGNITLLVNINLQSNGLTGRLPGELGNLRYLQELRLDRNRLQGSVPASSGSNFDSNMHEMYASKANLTGFCRSSQLKVADFSYNFLVGDIPKCLEYLPRSSFQGNCLQSKELKQRPSIQCAGASPAKSQPVVNPNHHPAQYVSKHHVTSKPVWLFTLEIVSGAMVGSLFLVALLTACQKCNKKASIIIPWKKSPSQKDHTAVYIDPEMLKGVRSYSRQELEVACEDFSNIIGSSPDSVVYKGNMKGGPEIAVISVSIKEERWTGYLELYFQREVADLARLNHENTGKLLGYCRESIPFTRMLVFEYASNGTLYDHLHCYEEGCQFSWTRRMKIVIGIARGLRYLHTEIEPPFTISELNSSAVYLTEEFFPKLVDFESWKSILERSEKNSGSIGSQGAVCVLPNSLEARRLDTKGNIYAFGVLLLEIISGRPPYCKEKGYLVDWAREYLEMPEVMSYVVDPELKHFRYDDLKVICEVITLCINPDTTARPSTRELCSMLESRIDTSISMELNSSSLAWAELALLS* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0248 672 ProSiteProfiles Protein kinase domain profile. 373 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0248 672 Gene3D Ribonuclease Inhibitor 40 152 IPR032675 -
Lan6g0248 672 SUPERFAMILY Protein kinase-like (PK-like) 351 647 IPR011009 -
Lan6g0248 672 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 21 670 - -
Lan6g0248 672 Gene3D Phosphorylase Kinase; domain 1 347 454 - -
Lan6g0248 672 Gene3D Transferase(Phosphotransferase) domain 1 455 662 - -
Lan6g0248 672 Pfam Protein tyrosine and serine/threonine kinase 376 645 IPR001245 GO:0004672|GO:0006468
Lan6g0248 672 Gene3D Ribonuclease Inhibitor 153 274 IPR032675 -
Lan6g0248 672 SUPERFAMILY L domain-like 41 246 - -
Lan6g0248 672 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
Lan6g0248 672 PANTHER PROTEIN MALE DISCOVERER 2 21 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0248 Lan-Chr6 1861328 1865245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0248 14 652 Receptor kinase-like Gene Family AT2G35620 28.418 5.83e-54 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lan6g0248 PK_Tyr_Ser-Thr 1.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0248 - - gmx:100794714 1097.03