Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0244 ATGGTGATTTCTAACGATAACATTTCTAACTCAATCAACCCCACAACTTCTTCTTTCCAAGATCCAATGGGCACCAGAAAGATTGGGCAGAACAACAGAAGAGCCTTAGGTATTATCAATCAGAATATGGCAGTGGAAGGTCGATACCCGTGTGTCGTTAACAAGAGGGGTTTTTCAGAGAGATTTGCTGCACAAGTTGCTAGCACAAAGCAAACTCGCGCCGAGGGTAAATTTGAACATGGATCAAAGAAGTCAAACTTGGGAATCTCAAATTCAAATGAATTTGGACAGTTTATCTTTATTGATGATGATGAACCCAAGTCAACAGAAGATCAATCAGTGCCCATGTCTCTAGAGCAAACTGAAGTATTGCACAATGAACCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAGATGAAGAGCCTCTTTTGGACATTGATAGCAGTGATGCAAATAACCCTCTTGCAGTTGTGGACTATATTGAAGATCTTTATGCACATTACAGAAAAATTGAGGGTACTAGCTGTGTCTCACCGAATTATATGGCAGAACAATTCGACATTAATGAAAGAATGAGAGCCATACTAATTGACTGGCTTATTGAGGTGCACGACAAATTCGATCTCTTGCACGAGACATTGTTTCTCACAGTTAATCTCATAGATAGATTTTTGGAAAAGCAGACAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTGGTTGCTTTGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTTCCTGTGGTTGGAGATCTTATTCTTATATCAGACAAAGCCTATTCCAGGAAAGAAGTTCTGGAAATGGAGAAGTTGATGGTGAACACATTGCAGTTTAACATGTCTGTGCCAACATCATATGTTTTTATAAAAAGGTTCCTGAAAGCAGCTCAAGCTGACAAAAAAGTTGAGCTACTAGCTTTCTTCTTGGTTGAGCTATCTCTAGTTGAATATGAGATGTTGAAGTTCCCACCATCTTTGCTAGCTGCAGCTGCAGTCTACACAGCTCAATGCACTGTCTATAGTGTGAAACAGTGGAGTAAGACATGTGAATGGCATTCCAATTACTCAGAAGATCAGCTATTAGAGTGCTCGAGTTTAATGGTTGATTTCCACAAGAAGGCTGGGACAGGGAAACTTACAGGGGTATATAGGAAATATTGCTCATCTAAGTTTATCTATGCTGCAAAATATGAACCAGCAAGTTTTCTTCTAGAGAACAACACATTGTAG 1257 0.3978 MVISNDNISNSINPTTSSFQDPMGTRKIGQNNRRALGIINQNMAVEGRYPCVVNKRGFSERFAAQVASTKQTRAEGKFEHGSKKSNLGISNSNEFGQFIFIDDDEPKSTEDQSVPMSLEQTEVLHNEPDQMEEVEMEDIDEEPLLDIDSSDANNPLAVVDYIEDLYAHYRKIEGTSCVSPNYMAEQFDINERMRAILIDWLIEVHDKFDLLHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVALLLACKYEEVSVPVVGDLILISDKAYSRKEVLEMEKLMVNTLQFNMSVPTSYVFIKRFLKAAQADKKVELLAFFLVELSLVEYEMLKFPPSLLAAAAVYTAQCTVYSVKQWSKTCEWHSNYSEDQLLECSSLMVDFHKKAGTGKLTGVYRKYCSSKFIYAAKYEPASFLLENNTL* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0244 418 MobiDBLite consensus disorder prediction 1 25 - -
Lan6g0244 418 SMART cyclin_7 296 378 IPR013763 -
Lan6g0244 418 SMART cyclin_7 199 283 IPR013763 -
Lan6g0244 418 SUPERFAMILY Cyclin-like 153 289 IPR036915 -
Lan6g0244 418 PANTHER CYCLINS 23 412 IPR039361 -
Lan6g0244 418 SUPERFAMILY Cyclin-like 291 409 IPR036915 -
Lan6g0244 418 Gene3D - 164 404 - -
Lan6g0244 418 PIRSF Cyclin_A_B_D_E 5 417 IPR039361 -
Lan6g0244 418 Gene3D - 178 290 - -
Lan6g0244 418 SMART Cyclin_C_2 292 409 IPR004367 -
Lan6g0244 418 Pfam Cyclin, C-terminal domain 292 406 IPR004367 -
Lan6g0244 418 CDD CYCLIN 193 282 IPR013763 -
Lan6g0244 418 Pfam Cyclin, N-terminal domain 165 290 IPR006671 -
Lan6g0244 418 ProSitePatterns Cyclins signature. 194 225 IPR006671 -
Lan6g0244 418 CDD CYCLIN 290 377 IPR013763 -
Lan6g0244 418 PANTHER CYCLIN-B2-1 23 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0244 Lan-Chr6 1825121 1828188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0244 12 413 Core Cell Cycle Gene Families AT2G17620 59.765 1.97e-162 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0244 K21777 - gmx:100798068 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0157 17 985111 988108 Lan6g0244 6 1825121 1828188 LSH