Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0224 ATGATGTTGTTTCATTCAACCACACCTCTGTTCAATCCTCAACCTCACAAACTCTTCTTTCCAATCCCCTTCTTCATTTCCACTCTCACTCCCAGAAAGATTCAACCTTTACAAACTCTCAAATTCACCACTCATTGGAACCTCTTCTACTCTCTCTCCTCATCCTTCGACAACCAAGATGACTTCGAAGAACACGTTATTGGCGACTGTGTCGTTTTTGAAGAAGGCATTTTTGAAGACCCCATTTTCAGAAATGACACAAATTCTCACAATCTCACCAAACCCAAACCAAAACCAGTTCCCAAAAACAAAAACAAAAAGGTGGCACCACCAGAAATTGTGGGTGAGAATTTGGTTCCAGAGAAGTGGAGAGAAATTCAAGCTGAGATTAACATAACAAAGAAAGAAAGGAGGAAGATTGCACAGGAAATACAGTTTAATAGCAAGGTTGATAAGAAGAGAAGAGGTTTGATTCCATTGAGGGATATGAATTTGAATGAGTATAAGGCTTATAAGGAAGCTACATTGGCACAGATGAAACCACTTTTTCTAGATAACCCTTCCAGATTTCCGGTTAAAGAAGAGAACTTTGTTGAAAAAGAAGAGGATTATGATGAATTCGGTGGCATTGAGCGTGTTAAGCCAAAGAATCCTAGATGGGCTGTTTATGGAAGGGGTTTGGAGGATGTTTCTGAATCTTTCAATAGTGAATTTTATGACCCTGATGCTAATAAGAACACTGAAGGTCGTAGAAAGTTGCTTACTAAGGAGGAGAAGGTTTTGTTGAATAAGAAAATACCAGACATTGCTACTGCTACTTCAGATAAATGGCTTCCTCTACATACCTTAGCTGCATGTGGAGAATTTTATCTCGTAGATGCTTTGATGAAGCATGATGTCGATATTAATGCAGTGGATAAGGATGGTTTGACTGCTCTTCACAAAGCAATAATTGGTAAAAAGCAAGCCATAACCAACTATCTACTGAGAAATTCAGCTAATCCATTTTTAAAGGATAAAGATGGGGCGACCTTGATGCATTATGCAGTGCAAACAGCTTCTAGCCAGACAATTAAAATACTTTTATTGTATAATGTGGATATAAATCTTCAAGACGATGATGGCTGGACACCGTTACATGTCGCTGTTCAAGCTCAGAGAACAGATTTAGTGAGGCTTCTGCTAATTAAAGGTGCTAATAAGACATTAAAAAACAAGGATGGTTTAACACCACTTGATCTATGTCTTTACTATGGTCAAGGTCTTAGAACATACGAGCTAATCAAGTTGTTGAAGCAGCCACAAAGGAGAGCTACATTTTTACCACAAATGAGGACAAATGTTGAAAGTGTTGAACAAACAAATCAAGAATAA 1374 0.3806 MMLFHSTTPLFNPQPHKLFFPIPFFISTLTPRKIQPLQTLKFTTHWNLFYSLSSSFDNQDDFEEHVIGDCVVFEEGIFEDPIFRNDTNSHNLTKPKPKPVPKNKNKKVAPPEIVGENLVPEKWREIQAEINITKKERRKIAQEIQFNSKVDKKRRGLIPLRDMNLNEYKAYKEATLAQMKPLFLDNPSRFPVKEENFVEKEEDYDEFGGIERVKPKNPRWAVYGRGLEDVSESFNSEFYDPDANKNTEGRRKLLTKEEKVLLNKKIPDIATATSDKWLPLHTLAACGEFYLVDALMKHDVDINAVDKDGLTALHKAIIGKKQAITNYLLRNSANPFLKDKDGATLMHYAVQTASSQTIKILLLYNVDINLQDDDGWTPLHVAVQAQRTDLVRLLLIKGANKTLKNKDGLTPLDLCLYYGQGLRTYELIKLLKQPQRRATFLPQMRTNVESVEQTNQE* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0224 457 SMART ANK_2a 341 370 IPR002110 GO:0005515
Lan6g0224 457 SMART ANK_2a 308 337 IPR002110 GO:0005515
Lan6g0224 457 SMART ANK_2a 374 403 IPR002110 GO:0005515
Lan6g0224 457 SMART ANK_2a 407 440 IPR002110 GO:0005515
Lan6g0224 457 SMART ANK_2a 275 304 IPR002110 GO:0005515
Lan6g0224 457 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN, CHLOROPLASTIC-LIKE 27 434 - -
Lan6g0224 457 MobiDBLite consensus disorder prediction 84 108 - -
Lan6g0224 457 ProSiteProfiles Ankyrin repeat profile. 308 340 IPR002110 GO:0005515
Lan6g0224 457 ProSiteProfiles Ankyrin repeat profile. 275 307 IPR002110 GO:0005515
Lan6g0224 457 ProSiteProfiles Ankyrin repeat region circular profile. 374 406 - -
Lan6g0224 457 ProSiteProfiles Ankyrin repeat profile. 374 406 IPR002110 GO:0005515
Lan6g0224 457 Gene3D - 234 347 IPR036770 -
Lan6g0224 457 Pfam Ankyrin repeats (3 copies) 324 405 IPR002110 GO:0005515
Lan6g0224 457 ProSiteProfiles Ankyrin repeat profile. 341 373 IPR002110 GO:0005515
Lan6g0224 457 Pfam Ankyrin repeats (many copies) 279 321 IPR002110 GO:0005515
Lan6g0224 457 Gene3D - 348 440 IPR036770 -
Lan6g0224 457 ProSiteProfiles Ankyrin repeat region circular profile. 341 373 - -
Lan6g0224 457 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 27 434 - -
Lan6g0224 457 SUPERFAMILY Ankyrin repeat 261 420 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0224 Lan-Chr6 1712693 1715750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0224 239 434 Miscellaneous Gene Families AT2G31820 30.348 6.09e-14 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1091 18 15986028 15989871 Lan6g0224 6 1712693 1715750 LSH