Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0223 ATGGCGGAAACTAACGGTAACGGTTTCATCTACCTCCACGGCGATCTCCACCTTAAAATCATCGAAGCTCGCCGGTTACCTAACATGGACCTCATGTCGGAGCGTTTCCGCCGCTGCATCACCGCCTGTGACACTATTAACTTACCATCCTCCAAAACCGTCGCTAAATCCGGCGACGGGGACCACCGTACCCACCAACACCGCCGGAAAATTATCACCAGTGACCCTTACGTCACCGTTACGGTCCCTCAGGCCACCGTGGCGCGCACGCGCGTGCTTAAGAACTCGCAAAACCCTTGCTGGGATGAGACTTTCAGTATCCCCTTAGCGCATTCCGTTGAGTTTCTTGAGTTTCGCGTCAAAGACGACGACGTTTTCGGTGCACAGATAATGGGAGCGGTTAAGATCCCGGCGGTGGACATTGCCGCCGGCGATGTGATTTCCGGGTGGTTTCCGATTCTCGGAGCTAACGAGAAGCCGCCGAAGCCTGACACTGCGCTTCGAATCGAAATGCAGTTCAAGGCAGTTTCTGAAAACCCGTTGTACCGTAATGGCATTGCGGCGGATCCGGAGCACAGGGGCGTGAGGCACACGTACTTTCCGGTGAGGAAGGGAAGCTCTGTGAGGCTTTACCAAGACGCACAATGTTCCGATGGAACATTACAAGAGATTCAGCTTGAGAATGGAAATGTTTATAGGCAAGGGAAGTGTTGGGAAGATATATGTTATGCAATAAGTGAGGCTCATCATATGGTGTATCTTGTGGGTTGGTCAATTTACCATAAGATAAAGCTTGTTAGGGAACCAACTAGGCCATTGCCAAGAGGTGGAGATTTGACACTTGGTGAATTGCTTAAGTATAAGTCTGAAGAAGGGGTTAGAGTTCTGTTGCTGATTTGGGATGATAAGACTTCACATGACAAGATCTTCTTCAAATCGGCTGGAGTAATGCAGACTCATGATGAGGAAACAAGGAAGTTTTTTAAACATTCTTCTGTTATGTGTGTTCTAGCACCCCGGTACGCTAGCAGCAAGATGAGCTTCTTGAAGCAACAGGTTGTTGGAACTGTCTTCACACACCACCAAAAATGTGTTATTGTGGACACACAGGCTTCTGGCAATAACCGAAAGATAACTTCTTTTATAGGAGGTCTTGATATATGTGATGGTCGCTATGACACACCCGAGCATCGACTTTTTCGTGATCTTGACACTGTATTTTCGGGTGATTTTCACAATCCTACGTTTCCTGCTGGAACTAGGGTTCCAAGGCAACCGTGGCATGATTTGCACTGCAGAATAGATGGGCCCGCTGCATATGATGTTCTTATTAATTTTGAGCAGCGATGGAGAAAATCAACTAAGTGGAAAGAGTTTGCAATAATTTTCAAAAAAACTTCTCATTGGCATGATGATGCTTTAATAAGAATTGAACGCATCTCGTGGATATTAAGTCCTTCCATTCCAACTCATACTTCAAGGAATGCTTATACTACTGTTCCAGAGGATGACCCTTTAGTATGGGTTTCTAGTGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGCTCCCTGAAAGGATTTCCCAAAGGTGTTGATGTTGCTCATTCCCAGAATCTAATATGTGCTAAAGATTTGGTGATAGACAAGAGCATTCAAACGGCATACATTCAAGCAATCAGATCTGCACAGCATTTTATCTATATTGAAAACCAATATTTTATTGGATCATCATATGCATGGCCATCTTACAAAGATGCAGGGGCTGATAATCTCATCCCAATGGAATTGGCACTGAAAATTGCTAGTAAAATCAAAGCTAAGGAGAGATTTGCTGTTTATATTGTTTTACCAATGTGGCCAGAAGGTGATCCAAAATCTGCCGCTATGCAAGAAATCCTCTTTTGGCAGAACCAGACAATGCAAACAATGTATGATGTTGTTGCCAAGGAATTAAAATCAATGCAACTTACTGATGTGCACCCGCAAGATTACCTCAACTTCTATTGCCTTGGTAATCGGGAAGAATTTAATGAAGAAAGCTCAAGCACAAATGGTGCACAGGTCTCTGGAGCATATAAATGTCGCCGATTTATGATTTATGTGCATGCTAAGGGGATGATTGTTGATGATGAGTATGTTATAGTGGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTGCATATCAACCTCATTACACTTGGTCTGCGAAGAAAAGGCACCCGTATGGTCAGATTTATGGTTACAGAATGTCACTGTGGAGAGAGCACCTTGGGATGTTAGAGGAAAATTTTGAGGAACCAGAGAAATTGGAGTGTGTACGTAAAGTAAACGAAATTGCAGAAGATAATTGGAGAAGATACACATCTGAAGAATTTTCACTATTGCAAGGACATATTCTTAAGTATCCTGTAAAGGTAGATTCCGATGGCCAGATTAGTTCCTTACCGGATTGCGAGAATTTCCCAGATGCTGGTGGTAAGATACTTGGGACTCACTCTCCAACAATTCCAGATATCCTAACAACATAA 2580 0.4384 MAETNGNGFIYLHGDLHLKIIEARRLPNMDLMSERFRRCITACDTINLPSSKTVAKSGDGDHRTHQHRRKIITSDPYVTVTVPQATVARTRVLKNSQNPCWDETFSIPLAHSVEFLEFRVKDDDVFGAQIMGAVKIPAVDIAAGDVISGWFPILGANEKPPKPDTALRIEMQFKAVSENPLYRNGIAADPEHRGVRHTYFPVRKGSSVRLYQDAQCSDGTLQEIQLENGNVYRQGKCWEDICYAISEAHHMVYLVGWSIYHKIKLVREPTRPLPRGGDLTLGELLKYKSEEGVRVLLLIWDDKTSHDKIFFKSAGVMQTHDEETRKFFKHSSVMCVLAPRYASSKMSFLKQQVVGTVFTHHQKCVIVDTQASGNNRKITSFIGGLDICDGRYDTPEHRLFRDLDTVFSGDFHNPTFPAGTRVPRQPWHDLHCRIDGPAAYDVLINFEQRWRKSTKWKEFAIIFKKTSHWHDDALIRIERISWILSPSIPTHTSRNAYTTVPEDDPLVWVSSEDDPENWHVQIFRSIDSGSLKGFPKGVDVAHSQNLICAKDLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIASKIKAKERFAVYIVLPMWPEGDPKSAAMQEILFWQNQTMQTMYDVVAKELKSMQLTDVHPQDYLNFYCLGNREEFNEESSSTNGAQVSGAYKCRRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHYTWSAKKRHPYGQIYGYRMSLWREHLGMLEENFEEPEKLECVRKVNEIAEDNWRRYTSEEFSLLQGHILKYPVKVDSDGQISSLPDCENFPDAGGKILGTHSPTIPDILTT* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0223 859 Pfam C2 domain 14 153 IPR000008 -
Lan6g0223 859 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 704 731 IPR001736 GO:0003824
Lan6g0223 859 Gene3D Endonuclease Chain A 534 756 - -
Lan6g0223 859 Pfam Phospholipase D C terminal 778 848 IPR024632 -
Lan6g0223 859 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 356 391 IPR001736 GO:0003824
Lan6g0223 859 PANTHER PHOSPHOLIPASE D DELTA 8 859 - -
Lan6g0223 859 PANTHER PHOSPHOLIPASE D 8 859 IPR015679 -
Lan6g0223 859 Gene3D Endonuclease Chain A 220 473 - -
Lan6g0223 859 SMART pld_4 704 731 IPR001736 GO:0003824
Lan6g0223 859 SMART pld_4 356 391 IPR001736 GO:0003824
Lan6g0223 859 Pfam PLD-like domain 563 741 IPR025202 -
Lan6g0223 859 Pfam Phospholipase D Active site motif 356 391 IPR001736 GO:0003824
Lan6g0223 859 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Lan6g0223 859 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 173 IPR035892 -
Lan6g0223 859 CDD C2_plant_PLD 10 173 - -
Lan6g0223 859 SUPERFAMILY Phospholipase D/nuclease 198 462 - -
Lan6g0223 859 PIRSF PLD_plant 1 859 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lan6g0223 859 Gene3D C2 domain 12 182 IPR035892 -
Lan6g0223 859 SUPERFAMILY Phospholipase D/nuclease 555 789 - -
Lan6g0223 859 SMART C2_3c 15 150 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0223 Lan-Chr6 1704693 1711692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0223 1 695 Phospholipase D Gene Family (Wang group) AT4G35790 70.899 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0223 K01115 - gmx:100814486 1496.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0174 17 1094878 1102250 Lan6g0223 6 1704693 1711692 LSH