Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0214 ATGGGTATCTGTTTTTCCACCACAAAGGTGAGTGGCTCAAACAGCAACAATAACAACAACGTCGCCGCCGCCGCCGGATCAGCCACCACTTCCACCGCCACACCAAATCCGAATCGTAAATGGAGTTCGAACACGCAATCCGATGTGTCAACCACGATGGTGAGTATCCAGAAGCAGCAGCAACCGTTGACCGGTGGTCAACGGCAGAAGGTGAAGGAAGAGAGTCAGAATAATAATCATAGAACGAAAGACAAGGTTTCTTCGAGGCGCAATGGGGGGCACGTGCCATGTGGAAAACGCACAGATTTCGGTTATGAGAAAGATTTTGATCTAAAATTCTCGCTTGGGAAATTGTTGGGGCATGGACAATTCGGTTACACCTATGTTGGAATTCATAAAGCTAATGGGGATCGTGTTGCCGTTAAGAGACTCGAGAAGAACAAGATGGTTCTTCCTATAGCTGTTGAGGATGTTAAGCGAGAGGTCAAGATATTGAAAGAACTTGCAGGCCATGAAAATGTGGTTCAATTCTATAATGCTTTTGAGGATGATTCATATGTGTACATAGTTATGGAGTTATGCGAGGGAGGAGAACTGCTAGACCGTATATTGTCCAAGAAGGACAGCCGGTATACTGAAAAAGATGCCGCTGTTGTTGTAAGGCAGATGCTTAAGGTTGCAGCTGAGTGTCATTTACATGGTTTGGTACATAGGGACATGAAACCAGAGAATTTTCTTTTCAAATCAACTAAAGATGATTCATCTTTAAAGGCTACCGATTTTGGCTTGTCTGATTTCATTAAACCTGGAAAGAGATTTACAGATATTGTTGGCAGTGCTTACTATGTTGCACCCGAAGTTTTAAAACGGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATCACATACATATTGCTTTGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTATTTTCAAAGAGGTGTTGCGGAACAAGCCTGATTTCCGCCGGAAGCCATGGCCAACAATAAGTAATGCCGCTAAAGATTTTGTAAAGAAATTGTTGGTAAAGGATCCTCGTGCAAGATTAACTGCTGCTCAGGCTCTATCACATCCATGGGTTAAAGAAGGAGGAGAGGCATTGGAGATTCCTATTGATATATCTGTCCTGAGTAACATGCGACAATTTGTGAAGTATAGTCGATTGAAACAGTTTGCACTGAGGGCATTGGCTAGCACACTTAATGAAGAAGAGTTGTCTGATCTAAAAGATCAGTTTGATGCAATAGACGTGGACAAAAATGGTGCCATTAGCCTTGAAGAGATGAGACAGGCTCTTGCAAAAGATCTCCCTTGGAAGTTGAAAGAATCACGTGTACTTGAGATACTGCAAGCGATAGATAGCAACACAGATGGGCTAGTGGATTTCACTGAGTTTGTAGCAGCTGCGTTGCATGTGCACCAATTGGAGGAACATGATTCTGAGAAGTGGCAAGAACGGTCACAGGCTGCTTTTCAGAAATTTGACTTGGATAAGGATGGGTATATTACTCCAGATGAACTTAGAGTGCATACGTGCCTGAAAGGCTCCATTGATCCATTGCTTGAGGAAGCCGATATTGACAAAGATGGAAAGATTAGCCTACCAGAATTTCGGAGACTTCTAAGAACTGCAAGCATTGGATCTCGAAACATGATGAGCCCGCACAGCCGTCTGCGGAAGATATAG 1725 0.4365 MGICFSTTKVSGSNSNNNNNVAAAAGSATTSTATPNPNRKWSSNTQSDVSTTMVSIQKQQQPLTGGQRQKVKEESQNNNHRTKDKVSSRRNGGHVPCGKRTDFGYEKDFDLKFSLGKLLGHGQFGYTYVGIHKANGDRVAVKRLEKNKMVLPIAVEDVKREVKILKELAGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKDDSSLKATDFGLSDFIKPGKRFTDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTAAQALSHPWVKEGGEALEIPIDISVLSNMRQFVKYSRLKQFALRALASTLNEEELSDLKDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAAALHVHQLEEHDSEKWQERSQAAFQKFDLDKDGYITPDELRVHTCLKGSIDPLLEEADIDKDGKISLPEFRRLLRTASIGSRNMMSPHSRLRKI* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0214 574 MobiDBLite consensus disorder prediction 1 72 - -
Lan6g0214 574 Gene3D Phosphorylase Kinase; domain 1 107 198 - -
Lan6g0214 574 Gene3D - 393 553 - -
Lan6g0214 574 MobiDBLite consensus disorder prediction 73 90 - -
Lan6g0214 574 SMART serkin_6 113 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0214 574 ProSiteProfiles EF-hand calcium-binding domain profile. 453 488 IPR002048 GO:0005509
Lan6g0214 574 Pfam Protein kinase domain 115 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0214 574 CDD STKc_CAMK 112 372 - -
Lan6g0214 574 SUPERFAMILY Protein kinase-like (PK-like) 112 388 IPR011009 -
Lan6g0214 574 ProSiteProfiles EF-hand calcium-binding domain profile. 495 530 IPR002048 GO:0005509
Lan6g0214 574 SMART efh_1 529 557 IPR002048 GO:0005509
Lan6g0214 574 SMART efh_1 499 527 IPR002048 GO:0005509
Lan6g0214 574 SMART efh_1 420 448 IPR002048 GO:0005509
Lan6g0214 574 SMART efh_1 457 485 IPR002048 GO:0005509
Lan6g0214 574 SUPERFAMILY EF-hand 405 556 IPR011992 -
Lan6g0214 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Lan6g0214 574 ProSitePatterns EF-hand calcium-binding domain. 538 550 IPR018247 -
Lan6g0214 574 ProSitePatterns EF-hand calcium-binding domain. 508 520 IPR018247 -
Lan6g0214 574 ProSiteProfiles EF-hand calcium-binding domain profile. 416 451 IPR002048 GO:0005509
Lan6g0214 574 PANTHER SERINE/THREONINE-PROTEIN KINASE 47 564 - -
Lan6g0214 574 ProSiteProfiles EF-hand calcium-binding domain profile. 533 560 IPR002048 GO:0005509
Lan6g0214 574 ProSitePatterns EF-hand calcium-binding domain. 429 441 IPR018247 -
Lan6g0214 574 ProSiteProfiles Protein kinase domain profile. 113 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0214 574 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 47 564 - -
Lan6g0214 574 Pfam EF-hand domain pair 501 554 IPR002048 GO:0005509
Lan6g0214 574 Pfam EF-hand domain pair 419 481 IPR002048 GO:0005509
Lan6g0214 574 MobiDBLite consensus disorder prediction 1 99 - -
Lan6g0214 574 Gene3D Transferase(Phosphotransferase) domain 1 199 392 - -
Lan6g0214 574 Gene3D - 414 483 - -
Lan6g0214 574 ProSitePatterns EF-hand calcium-binding domain. 466 478 IPR018247 -
Lan6g0214 574 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0214 Lan-Chr6 1612291 1617698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0214 1 571 EF-hand Containing Proteins AT2G17890 73.666 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan6g0214 Pkinase 1.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0214 K13412 - gmx:100817249 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1076 18 15900210 15905238 Lan6g0214 6 1612291 1617698 LSH