Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0207 ATGAATACCAAGTTCAGATGCATGTTTGATAGAATATGCAGTTCATGGAAGAAAAGTAGTAGTAGACCAAATGGTCGAAGAATTTTCCACAGGGATGTTGAGAAAGAAGAATTCCAATATGCTAGTACTCATTGTCTCTCATCCTATTACAGTGTCTTTGTTGTGAGACTAGCAATCATGGTGATGCTAGCCATCTTGATAGGGCTACTAACTATTCTAACATGGCATTTCACAAAGATTTATACAACAAAATCACTTAATAGTTTGGCGTATGGTCTGCGTTACGAACTTCTGCAACGTCCCATCTTGAGGATGTGGAACATTTTGAACTCCACTGCCGAAATTACCACAGCCCAGGTCAAGCTTTCTCAATATGTGATCCGACGTTACAGCAACCCTGCCTCTCAAGCAGAGCAAGTTGAGCTGTATGAAGCAATGAGGGCTGTAACATGGGCAATGTTTGTTAGTCGAAAAGCTCTCAACTCAATAACTATTAATTATAAAAATGGATTTGTCCAAGCATTCCATAGAGATCTGAAGGATAACAACACATTCTACATCTACTCTGATCTAGCAAATTACTCCATAGGTTCAAGCAACTCAAATGAGATGGCTTCCTTTTCAACACATCAAGCTTGGGACGATAAAGCCATTCGTGGTAACAGGTCTGCGATTTGGTATCGCGAACCCCTTGACCCTCTCACTGGTGAAAAGATTGGAAAAGCTATGCAAATTGCACCTGATGACTTGATCAACATAGCTGGCCTTTCACAGGTACCTGATGGTGTAGCTTCATGGCATGTTGCAGTGAGCAAGTTCACAGATTCGCCTTTGCTTTCAGCAGCATTGCCGGTTTGGGACTCGTCTAATAAGAGTATTATAGCAGTTGTTGGTGTCACAACTGCACTTTATAGTGTAGGACAGTTAATGAGAGAACTAGTTGAGTTGCACAGTGGTCATATGTATTTGACTTCTCAAGAGGGTTACTTGCTTGCAACTTCCACAAGTTCACCTTTACTCACAAATTCAACAAAGTCTCTTAAGCTTAAGATGCCTGTTGATTGTGAAGATGATGTAATACGACTCGGAGCTGAGTGGTTACAGAGAACTTATGGTAACAATTTTCCTGCGGGCGATGAGGTTCATGTAGAGAATGTCAAGCTAGGCCACCAGCAATATTACATTGACTCATTCTTCCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTAATAATCATACCAAGAAAGTATATCATGGGGCAGGTAGATGAAAGAGCCTTCAAAACGTTGGTTATTCTGATATCCGCCGCATTATGTATTTTAGTCATTGGATGTGTTTGCATTTTGATACTGACAAATGGAGTATCAAAGGAAATGAATCTAAGAGCAGAACTTATAAATCAACTGGAAGCAAGAAGGAAGGCAGAAGCATCAAGCAACTATAAAAGTCAATTTCTTGCAAACATGAGTCATGAGCTGAGGACACCTATGGCAGCAGTAATCGGATTGCTCGACATTCTTATATCTGATGACTGTCTAACAAATGAACAATATGCAACAGTCACTCAAATAAGGAAATGCTCAACTGCTCTTCTCCGTCTTCTTAACAACATCTTAGATCTGAGCAAGGTGGAATCTGGAAAACTGGTCCTAGAAGATGCAGAATTTGACTTGGGAAGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTGCAGTGCATTAACCACAATGTAGAGACTGTTTTAGACCTGTCAGATGATATGCCAAACTTAGTCCGTGGCGATTCTGCTAGAGTAGTTCAAATTTTTACAAATTTGATCAACAATTCAATTAAGTTTACTCCATCGGGTCACATTATGCTGCGCGGATGGTGTGAAATACCATACAGTGATAGTCTAAGTTTTCCTCTAGAGCAGAAGAAATCATGTCGTGTACAAAACACCAGAGAGAAGCAAAATGCAAACCATGCAAAGAGAATATCTAAGAAAGATATCAAAGTGAAACTTTGGTTTGAAGTTGATGACACAGGCTGTGGAATTGATCCAAGTAAATGGGATTCAGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTAGACTGCATGGAGGCACTGGTCTTGGTCTTTGCATTGTCAGAAACATGGTTAAAAAGATGGGTGGAGAAATCAAGGTTGTTAAAAAGGAGGGCCCGGGAACACTGATGCGGTTGTGCTTGCTTCTCAGTGCACCTATAGATGTCACAGAACAACATTGTGCAATAGATTTCACAAACAATGGCTTAGTGGTATTGCTTGCACTGCACGGAAACATGGGTCGATTTATTGCGTCCAAGTGGTTACAGAAAAACGGAGTGTGTACTATGGAAGCATCTGAATGGAATGGACTAACACATATTTTGAGGGAAATCTTTCATGCAAGAAGTTCAGTTCATAATAATGACTTTGATGCACATTATCAAGTAAATGAGGGATTGAAGTCTAAATTACTTCACATACAAGATATGAGGAACCCCACTTTTGTCATTGTTGTAGACATTGATATACTTGACTTGAGCACAGATATTTGGAAGGAACAACTTAACTTCCTTTATAAGTACTTTGTTAGAGCAAAGTTTGTATGGATGCTAAATCATGACACCTCCAATACCATAAAGATGGAGCTCAGAAGAAAAGGGCACGTAGTCATGGTTAACAAACCTCTCTACAAGGCAAAAATTGTTCATATTTTGGAAGCTGTCATAAAGGAGAGGAATCTTCAGCTACAAAAGAAAAACATGACTGATCCAAGGACAACAATGAAAGAGAATGATTTGCATGAGTTTCTTGAGATTGATTCTACACATTTTGGTGCTGCTACATCTGATGATTCTGACATATCTGAAATGAGTGGTTCTAATCCTGCAAGTGCAAGTGGAGACAATAATGTGAGGCAAGAAGAGTCATGTCATAGCACTCCAAATTCAAACTATGCCAGTGAAGATATTGAACTTAAACCATTGTCAACTAAAGAAATATCATATCCAACAGATGCTAAAAGTCAAGAATCTGAATGTGATGAAACAAATAAGGTGAGTAGTTCAAGTAAAGTGGTAAATGCAAAGAAATCCCTTGAAGGCTTAAAGATATTGCTTGCAGAAGATACACCAGTACTTCAAAGGGTAGCAACCATAATGCTTGAAAAGATGGGAGCTTCTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTAGATGCTCTCAATTTCATACTAGGTGTTGAAGATTGTAGAAGGGAATCTCTCCAAAAAGAAAGAAACACAAGATCTCAAAAAGATATTTTGACATGCCCTTCATATGACTTGGTCCTAATGGATTGTCAGATGCCAAAAATGGATGGTTATGAAGCAACAAAGGCAATAAGAAAATCAGAAGTTGGAACAGGATTGCACATTCCCATTGTTGCTCTTACAGCACATGCAATGTCATGTGATGAAGCCAAATGCTTGGAAGTGGGTATGGATGCTTATTTAACAAAGCCAATTGACTTCAAGAAAATGGTGTCTACAATTCTTTCACTCACTAAAAGAGAATCTTGA 3576 0.3921 MNTKFRCMFDRICSSWKKSSSRPNGRRIFHRDVEKEEFQYASTHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLNSLAYGLRYELLQRPILRMWNILNSTAEITTAQVKLSQYVIRRYSNPASQAEQVELYEAMRAVTWAMFVSRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLANYSIGSSNSNEMASFSTHQAWDDKAIRGNRSAIWYREPLDPLTGEKIGKAMQIAPDDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKSIIAVVGVTTALYSVGQLMRELVELHSGHMYLTSQEGYLLATSTSSPLLTNSTKSLKLKMPVDCEDDVIRLGAEWLQRTYGNNFPAGDEVHVENVKLGHQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGQVDERAFKTLVILISAALCILVIGCVCILILTNGVSKEMNLRAELINQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPNLVRGDSARVVQIFTNLINNSIKFTPSGHIMLRGWCEIPYSDSLSFPLEQKKSCRVQNTREKQNANHAKRISKKDIKVKLWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNMVKKMGGEIKVVKKEGPGTLMRLCLLLSAPIDVTEQHCAIDFTNNGLVVLLALHGNMGRFIASKWLQKNGVCTMEASEWNGLTHILREIFHARSSVHNNDFDAHYQVNEGLKSKLLHIQDMRNPTFVIVVDIDILDLSTDIWKEQLNFLYKYFVRAKFVWMLNHDTSNTIKMELRRKGHVVMVNKPLYKAKIVHILEAVIKERNLQLQKKNMTDPRTTMKENDLHEFLEIDSTHFGAATSDDSDISEMSGSNPASASGDNNVRQEESCHSTPNSNYASEDIELKPLSTKEISYPTDAKSQESECDETNKVSSSSKVVNAKKSLEGLKILLAEDTPVLQRVATIMLEKMGASVVAVGDGQQAVDALNFILGVEDCRRESLQKERNTRSQKDILTCPSYDLVLMDCQMPKMDGYEATKAIRKSEVGTGLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKKMVSTILSLTKRES* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0207 1191 MobiDBLite consensus disorder prediction 954 1025 - -
Lan6g0207 1191 SMART HisKA_10 481 547 IPR003661 GO:0000155|GO:0007165
Lan6g0207 1191 Pfam Response regulator receiver domain 1043 1183 IPR001789 GO:0000160
Lan6g0207 1191 PRINTS Bacterial sensor protein C-terminal signature 669 683 IPR004358 GO:0016310|GO:0016772
Lan6g0207 1191 PRINTS Bacterial sensor protein C-terminal signature 687 697 IPR004358 GO:0016310|GO:0016772
Lan6g0207 1191 PRINTS Bacterial sensor protein C-terminal signature 704 722 IPR004358 GO:0016310|GO:0016772
Lan6g0207 1191 SUPERFAMILY CheY-like 1039 1188 IPR011006 -
Lan6g0207 1191 ProSiteProfiles Histidine kinase domain profile. 488 744 IPR005467 -
Lan6g0207 1191 CDD REC_hyHK_CKI1_RcsC-like 1043 1183 - -
Lan6g0207 1191 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 594 742 IPR003594 -
Lan6g0207 1191 ProSiteProfiles Response regulatory domain profile. 1042 1187 IPR001789 GO:0000160
Lan6g0207 1191 Gene3D - 469 548 - -
Lan6g0207 1191 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 997 - -
Lan6g0207 1191 PANTHER TWO-COMPONENT HISTIDINE KINASE 1013 1188 - -
Lan6g0207 1191 CDD HisKA 482 543 IPR003661 GO:0000155|GO:0007165
Lan6g0207 1191 PANTHER OSMOSENSOR HISTIDINE KINASE 1 997 - -
Lan6g0207 1191 PANTHER OSMOSENSOR HISTIDINE KINASE 1013 1188 - -
Lan6g0207 1191 Gene3D - 1019 1190 - -
Lan6g0207 1191 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 536 740 IPR036890 -
Lan6g0207 1191 SMART REC_2 1041 1183 IPR001789 GO:0000160
Lan6g0207 1191 MobiDBLite consensus disorder prediction 954 996 - -
Lan6g0207 1191 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 469 548 IPR036097 GO:0000155|GO:0007165
Lan6g0207 1191 SMART HKATPase_4 594 744 IPR003594 -
Lan6g0207 1191 Gene3D - 549 744 IPR036890 -
Lan6g0207 1191 Pfam His Kinase A (phospho-acceptor) domain 482 547 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0207 Lan-Chr6 1567698 1574047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0207 4 1188 Histidine Kinase Gene Family AT2G17820 65.163 0.0 1551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan6g0207 HATPase_c 5.4e-23 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0207 - - gmx:100814068 1945.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0207 6 1567698 1574047 Lan6g1490 6 21780891 21788694 PCT
Lan6g1490 6 21780891 21788694 Lan6g0207 6 1567698 1574047 PCT