Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0206 ATGGCCAAACTTGTGGTTGACAATGACTATCTCAAACAAATTAATAAGGCACGACGCCACCTTCGAGCTCTTATCTCTACAAGAAACTGTGCTCCTCTCATGCTTCGATTAGCGTGGCACGATGCTGGTACTTATGATGATAAAACTAGAACAGGAGGTCCCAACGGTTCTATTAGGAATGTACAAGAGTTGAATCATAGTGCTAACAAGGGCTTACAAAAAGCAGTTGAATTTTGTGAAGAAGTGAAGATCAAGCATCCAAAAGTTTCATATGCCGACCTTTACCAGCTAGCTGGTATTGTTGCAGTAGAAGTCACTGGGGGTCCAACAATTGACTTTATTCCTGGGAGAAAGGATTCATTGGACTCTCCACCAGAAGGGAGACTTCCAGATGCCAAACAAGGTGCATCACATTTAAGGGAAATCTTTTATCGCATGGGTCTAACTGATAAAGACATTGTGGCTCTGTCTGGAGGGCACACGTTGGGTAAGGCACATCTAGAACGCTCAGGCTTTGATGGTCAATGGACAAGGGACCCTTTGAAGTTTGATAACTCCTATTTTGTGGAACTACTGAAAGCTGATTCAAAAGACTTGTTGAAGCTTCCCACAGACAAGGCTTTAGTTGAAGATCCTAAGTTCCGCCAATATGTTGAACTGTATGCAACGGATGAGGATGTTTTTTTGGAAGATTATGCAGTCTCACACAAGAAACTGTCACAGTTAGGCTTCATTTTAAAGCCTGTTGCAGAGACTCGTTCCACATTGGCTCAAGGAGTTATAGCAATTGTTATTGCCACAACTGTGGTGATCCTGGGTTACTTGCTTGAAGTGAACAGAGAAACCGAGTGA 852 0.4284 MAKLVVDNDYLKQINKARRHLRALISTRNCAPLMLRLAWHDAGTYDDKTRTGGPNGSIRNVQELNHSANKGLQKAVEFCEEVKIKHPKVSYADLYQLAGIVAVEVTGGPTIDFIPGRKDSLDSPPEGRLPDAKQGASHLREIFYRMGLTDKDIVALSGGHTLGKAHLERSGFDGQWTRDPLKFDNSYFVELLKADSKDLLKLPTDKALVEDPKFRQYVELYATDEDVFLEDYAVSHKKLSQLGFILKPVAETRSTLAQGVIAIVIATTVVILGYLLEVNRETE* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0206 283 Gene3D - 17 243 - -
Lan6g0206 283 ProSiteProfiles Plant heme peroxidase family profile. 31 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Lan6g0206 283 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Plant ascorbate peroxidase signature 168 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Plant ascorbate peroxidase signature 220 244 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 SUPERFAMILY Heme-dependent peroxidases 9 247 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 Pfam Peroxidase 18 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g0206 283 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 3 278 - -
Lan6g0206 283 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 3 278 IPR044831 GO:0004601|GO:0034599
Lan6g0206 283 CDD ascorbate_peroxidase 2 244 - -
Lan6g0206 283 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
Lan6g0206 283 Gene3D Peroxidase, domain 2 130 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0206 Lan-Chr6 1563845 1566758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0206 89 243 Peroxidase AT4G17690 33.684 7.96e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0206 K00434 - gmx:100806101 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1081 18 15924033 15926326 Lan6g0206 6 1563845 1566758 LSH