Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0165 ATGTCTTCTCCTCATAACTCATCACCTGATGATGCTACACCTGACAATAGTACCCCAGATGATGCTGATAACTCATCACCGTCATCGGAACCACCACCATCAACGCCATCAGAATCATCACCTCCACCACCACCACCACCAGAAAATTCCTCACCCCCTCCAACACCACCCTCTTCTAGTAACTCTCCTCCACCACCATCATCGACAAACAATCCAACCCCACCATCATCCAATAATGAGTCTCCACCTCCTCCAGCGTCATCAGGCCATTCTCCACCATCACCTTCTAGTGGATCACCACCATCACCGCAACGCAAATCATTGCCAAGTAATAATAATAATAATAATAGCACACCATCTCCTCCTAACTCCGATGGCGGTGGTGACAATAACAACAAGGCAATTGTTGGAGCAGTGCTTGGTGTAGGGGTCGTTCTTCTGATTATGGTCGTCGTTTGTGTTATTTGCTCCAGGAGGAAGAAGAAAAGAAAGCCAATGTACTACTATGGAGAACAAGATGGAAAAGGGAATCACTATTACAATAATAGTGGTCAGCACCCTGGTGGTTATTATGGAGGTCCACCTCATCCGGACCATGTTGTTGGGGTTCAAAGTGGAATGGCTCCACCGAACAGTGGCTGGGGTGCACCACCTCCACTAATTATGAACAGTGCTGAAATGAGCGGCAATTTCTCAATGGGACCACCCCCTTTGCCTCCCCCTTCACCAAACCTTGCATTAGGCCTCAAGGGTACCTTCTCTTATGAAGAATTGGCAGCTGCTACAGGTGGATTTCATGATCAGAATTTAGTAGGACAAGGTGGGTTCGGTTATGTCCACAAAGGGGTGTTGCCAAATGGAAAGGAGATTGCAGTCAAGAGCTTGAAAGCAGGTAGTGGGCAAGGAGAGCGGGAGTTCCAAGCTGAGATTGACATCATTAGCCGTGTTCACCATCGCCATCTTGTGTCACTTGTTGGATATTGTATTGCTGGTGGACAGAGAATGTTGGTCTATGATTTTATTTCCAATGATACTTTAGAACATCACCTTCATGGAAAGGGTGTGCCTACCATGGATTGGCCTACTAGAATGAGGATTGCAATAGGATCAGCCAAAGGGCTTGCATATCTTCATGAGGACTGTCATCCTCGTATCATCCATCGCGATATCAAAGCTGCAAATGTCCTCATTGATGACAGCTTCGAAGCGAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTACTGATAATAATACTCACGTATCCACTCGTGTCATGGGAACTTTCGGGTACCTTGCCCCTGAATATGCAGCAAGTGGAAAATTGACAGAGAAATCGGATGTTTTCTCATTTGGTGTCATGCTATTGGAACTCATATCTGGGAAGCGACCTGTGGACCTCACAAACACCATGGAAGACAGCTTAGTGGACTGGGCTCGACCACTACTGACTCGTGGACTGGAGGAGGATCCTGGGAACTTCAGGGAGTTGGTTGATCCATTTTTGGAGGGAAATTACAATCCTCCTGAAATGGCAAGGATGGCTGCTTGTGCTGCTGGCAGCATTCGCCACTCTGCCAGGAAGCGCCTAAAAATGAGCCAGATTGTGAGAGCATTGGAAGGAGATGTTTCACTAGACGACTTGAAGGAGGGGATGATGAAGACAGGGATCTCCAATATTCACACCTCTTCATCTAGCTCAGATATTTCCTATGATACAATGCAATACAATCATGATATGCAACAGTTCAAAAAGGCAGTGTTTTCAAGCGAGGTAGGCACCAGCAGTGGCTCTAGTGGCGAAATGAGCCGTTTTCGAGAGACCCCGAGGAGGCTGAATTAA 1842 0.4691 MSSPHNSSPDDATPDNSTPDDADNSSPSSEPPPSTPSESSPPPPPPPENSSPPPTPPSSSNSPPPPSSTNNPTPPSSNNESPPPPASSGHSPPSPSSGSPPSPQRKSLPSNNNNNNSTPSPPNSDGGGDNNNKAIVGAVLGVGVVLLIMVVVCVICSRRKKKRKPMYYYGEQDGKGNHYYNNSGQHPGGYYGGPPHPDHVVGVQSGMAPPNSGWGAPPPLIMNSAEMSGNFSMGPPPLPPPSPNLALGLKGTFSYEELAAATGGFHDQNLVGQGGFGYVHKGVLPNGKEIAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCIAGGQRMLVYDFISNDTLEHHLHGKGVPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVMLLELISGKRPVDLTNTMEDSLVDWARPLLTRGLEEDPGNFRELVDPFLEGNYNPPEMARMAACAAGSIRHSARKRLKMSQIVRALEGDVSLDDLKEGMMKTGISNIHTSSSSSDISYDTMQYNHDMQQFKKAVFSSEVGTSSGSSGEMSRFRETPRRLN* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0165 613 Pfam Protein tyrosine and serine/threonine kinase 269 467 IPR001245 GO:0004672|GO:0006468
Lan6g0165 613 MobiDBLite consensus disorder prediction 1 130 - -
Lan6g0165 613 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Lan6g0165 613 Gene3D Phosphorylase Kinase; domain 1 245 340 - -
Lan6g0165 613 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 34 602 - -
Lan6g0165 613 SUPERFAMILY Protein kinase-like (PK-like) 239 539 IPR011009 -
Lan6g0165 613 MobiDBLite consensus disorder prediction 103 130 - -
Lan6g0165 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Lan6g0165 613 PANTHER RECEPTOR-LIKE KINASE 34 602 - -
Lan6g0165 613 MobiDBLite consensus disorder prediction 29 102 - -
Lan6g0165 613 MobiDBLite consensus disorder prediction 1 28 - -
Lan6g0165 613 MobiDBLite consensus disorder prediction 591 613 - -
Lan6g0165 613 ProSiteProfiles Protein kinase domain profile. 265 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0165 613 PRINTS Proline rich extensin signature 7 19 - -
Lan6g0165 613 PRINTS Proline rich extensin signature 20 41 - -
Lan6g0165 613 PRINTS Proline rich extensin signature 41 57 - -
Lan6g0165 613 PRINTS Proline rich extensin signature 62 79 - -
Lan6g0165 613 PRINTS Proline rich extensin signature 80 105 - -
Lan6g0165 613 SMART serkin_6 265 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0165 613 Gene3D Transferase(Phosphotransferase) domain 1 341 554 - -
Lan6g0165 613 MobiDBLite consensus disorder prediction 172 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0165 Lan-Chr6 1185528 1190037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0165 92 597 Trihelix Transcription Factor Family AT1G70460 48.369 5.70e-150 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan6g0165 PK_Tyr_Ser-Thr 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0165 - - lang:109332805 819.305