Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0150 ATGGCGAGTAATGGTTTTGGTAAATCAACGACGTCGTTTTCTCCACCAAGCCCATCTTGCTCTGGTAATAATAACAATGACGCTGGTGATTTTGAATGCAACATATGTTTCGATTTAGCTCAAGATCCAGTTATCACTCTATGCGGTCACTTATTTTGTTGGCCATGCCTATACCGTTGGCTCCATCATCATTCACATTCTCAAGAGTGTCCGGTTTGCAAGGCTCTCGTTCAAGAAGAGAAGTTGGTTCCTCTTTATGGGAGGGGAAAGAATCAGTCTGATCCCAGAACTAAATCTTATCCCGGGATGGAGATTCCTCATCGTCCTTCGGGGCAGAGGCCTCAAACCGCACCGCCCCCTCCTCCTAATGCGGCTGGTGCCAACCCTTTTGGGAATATTGGTTTTGGATTGATGGGAGGGTTTATTCCCATGGCCACTGCCAGTTTTGGGAATTTTACCCTTTCAACTGCTTTTGGTGGTTTGATACCGTCTCTGTTCAACATTCAGTTCCATGGGTTTCAAGGTGCCAATGTGTATGGGTCGACTGCGGGTTACCCCTTTGGGTCTAACACGTTTCATGGAGGGGGGAATTCACATGATTTTTCGCAGGGAACTGGTCAGGTGCAGAGGCAGGAGGACAATGTTTTGAAGAATCTGCTTTTGTTGATTGGTTTCCTTGTCCTTCTTACTGTCATTTTTCTGTGTTAA 708 0.4619 MASNGFGKSTTSFSPPSPSCSGNNNNDAGDFECNICFDLAQDPVITLCGHLFCWPCLYRWLHHHSHSQECPVCKALVQEEKLVPLYGRGKNQSDPRTKSYPGMEIPHRPSGQRPQTAPPPPPNAAGANPFGNIGFGLMGGFIPMATASFGNFTLSTAFGGLIPSLFNIQFHGFQGANVYGSTAGYPFGSNTFHGGGNSHDFSQGTGQVQRQEDNVLKNLLLLIGFLVLLTVIFLC* 236
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0150 235 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 4 233 IPR045103 GO:0005783|GO:0006511|GO:0061630
Lan6g0150 235 ProSiteProfiles Zinc finger RING-type profile. 33 74 IPR001841 -
Lan6g0150 235 ProSitePatterns Zinc finger RING-type signature. 48 57 IPR017907 -
Lan6g0150 235 MobiDBLite consensus disorder prediction 1 21 - -
Lan6g0150 235 PANTHER RING ZINC FINGER PROTEIN-RELATED 4 233 - -
Lan6g0150 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 95 IPR013083 -
Lan6g0150 235 MobiDBLite consensus disorder prediction 86 125 - -
Lan6g0150 235 SUPERFAMILY RING/U-box 29 86 - -
Lan6g0150 235 CDD RING-HC_AtRMA_like 31 75 - -
Lan6g0150 235 SMART ring_2 33 73 IPR001841 -
Lan6g0150 235 Pfam Zinc finger, C3HC4 type (RING finger) 32 73 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan6g0150 Lan-Chr6 1096171 1097520 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0150 23 233 C3H Transcription Factor Family AT2G23780 61.751 1.81e-87 256
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1029 18 15318470 15319827 Lan6g0150 6 1096171 1097520 LSH