Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0147 ATGGAAGTACTTCCTTGTTCTGGTGTACAATATGCTAGAGAATCTGAGTGCACTCAGCATAGTTCAGAAACAGCTTTTGTATATCAGGGAGAACCTAATTGGCAGATAAATGGTGAACAAGTTAAATTAGCAGCTAATCCACTGAAAGAACCATCCAATAAGATGGAAGGGCCTCAGATAGAAAGGCAAGGTGAAGGGAAACAGACTTTTTTTTATTTGTCGGATTGCCAATACATTGGAACTTCATGTTGTGATCGTCACGTGAAAGACCAAAAGGAATCCTGTGATTGCCATAATTTTAAAGAAGACGTGATAAGTGAACATTGCTTAACTTCTGAGACTTCTCTCGCTGTTGTGGATACGATTGAAAGTGAATTACCAAACAACATTAAAGAAGGAGATTTGTCATTGTCTAAACCCGCGTGGCTAGAGGGAGATGGATCTGTTGCATTGTGGGTAAAGCGGAGAGGGAAGTGGCAGGCTGGCATCAGATGTGCAAGGGCTGACTGGCCTTTATCAACTTTGAGAGCAAAGCCAACTCATGACCGGAAGCAATATTTTGTCATATTTTTTCCACACACTAGAATGTATTCTTGGGCTGATATACTTCTTGTTAGATCAATCAACGAGTTTCCCCATCCAATCACATATAAGACTCATCAGGTAGGACTGAAAATGGTAAAAGACTTGACTGTTGCACGTCGGTTTATAATGCAAAAGCTAGCTGTTGGCATGCTGAACATCATTGATCAGCTTCATTTTAATGCTTTGACAGAAATTGCTCGTGATGTAAAGGTCTGGAAGGAATTTGCAATGGAGGCTTCTCGTTGTAATGGTTATTCTGATGTTGGAAGAATGCTTCTAAAGCTGTATAATAGCATATTGCAGCACTACATAAATGCTGACTGGTTACAGCATTCTTGTCACTCTTGGGTTGAACGGTGTCAGAATGCAAATAGTGCTGATTCAGTAGAGCTGCTGGAGGAGGAATTGGTTGAGTCTATTATGTGGAATGATGTGAAAACTCTAAGGGATGAACCGGTACAACCAACATTAGGTTCTGAATGGAAAACCTGGAAGCATGACATAGTCAAATGGTTTTCAACATCACCTTCCTTATCAAGCAACAAATACACAGAGCCTCAGACTTCTGATGGTTCATACCAAGCAAACTTTCAGATTTCTAGAAAAAGGCCCAAACTTGAAGTTCGTCGTGCAGATACACATGCTTCACAAGTGGAAACCAAGGGGTTAGTTCACTCTATTACTCTTGAGACTGACCATGGATTCTTTAAGAAACAGGAAACATTAAGCACAGTAGTAGCTGAGAGTTTTAAACAGGATGATGTCCGGGAGGTATCCATGGCAACTGATTCATCGAATAATTTGGCGAATAAATGGAGTGAAATTGTAGTTGAGGCTGCCAGTTCTGATTTTTTGCATACCAAAGGAAAGGAGTCAACACCTATGACTGAATTAGCTGTTTCAAAATCTGCAGAACCCGATAGCAAGAATCGACAATGTATTGCTTATATTGAAGCTAAGGGAAGACAGTGTGTGAGATGGGCAAATGAAGGTGATGTATACTGTTGTGTGCATTTGTCCTCTCGTTTTTTGTGCAGCTCAGCAAAAGCTGAAAACCATTTTCCAGTTGATACTCCTTTATGTGAAGGTACAACTGTTCTGGGTACTAGATGTAAGCATCGGGCCCTACCTGGCTTTTCATTCTGTAAGAAACACCGGTCCTATGCTGAAACAGAGCAGAACTCAAATTTACCCTACAACGCATTGAAGAGGAAACACAGAAAAAGTTATACTGGTTCAGAGGACATGTTCTGCAAAGACATGGTATTGGTAGATGTTGGAAGTGCACTGCAAGTAGACTCAGTGACATCCATTGGTGATGATTCCTTGCATGGAAAAAGCAACTTGAAGAAGAAGCCAATACCTGATGAAAATGATCGTAGTGCAGCGGACACACTGCAGTGTATAGGTTCCAGTGTCTATGATAATGAGAATCCTTGTAAGGAATTTCCTAAGCATTATTGCTTGTACTGCGAAAGTCACCTTCCAAGCTGGCTCAAACGTGCAAGAAATGGTAAGAGTAGAATAGTATCAAAAGAAGTGTTCACAGAACTTTTGAGGGACTGCAGTTCATCGGAGCAAAAGGTACATCTGCATAAAGCATGTGAGCTTTTCTACAGGCTATTCAAAAGCATTTTATCAGTAAGAAACCCAGTTCCTGAGGATGTGCAGTTCCAGTGGGCTTTGACTGAAGCCTCTAAAGATTCTGGCGTAGAAGAATTTTTTACAAAGGTGGTTAATAGTGAGAAAGCGAGAATCAATTTGATTTGGGGATTCAATTATAAGATGGATGTAACCTCTGTCATTGAAGAACCACCTCTCTTGCCGTCCACTACTAACGATAGCCTTCATAATGAAAATGCCATTAAGTGTAAGATATGCTCTGCAGAATTTCCAGATGACCAAGAACTTGGTAATCATTGGATGGACATTCATAAAAATGAAGCACAGTGGCTGTTTAGAGGTTATGCTTGTGCCATTTGTCTGGATTCTTTTACTAGCAAGAAGTTGTTAGAAACTCATGTTCAGGAGAGACACCATGTGCAATTTGTTGAACAGTGCATGCTTCTCCAGTGCATTCCATGTTGTAGTCATTTTGGAAATACTGAGCAATTATGGCAGCACGTATTATCAATTCATCCTGATGATTTTAAGCCATCAAAAGCTCTTGACAAGAAAACTGTGTCTATTAGCAAAGATTCCCCACCAAAACATGACCAAGGAAATTCAGCCTCTTTGGAGAATCCTTCTGAGAATCCAGGTGCTGTGCGGAGATTTGTTTGCAGGTTATGTGGGTTGAAATTCAATATACTACCTGACCTAGGTCGACATCACCAAGCTGCTCATATGGGGCCCAATCTTGTCAGCAGCCGCCCCACAAAGCGCGGAGTTCGCTTTTATGCATACAGATTAAAATCTGGCAGACTTAGCCATCCTAGACTTACAAAAGGTGTCACAGCAACATCATACAAGATCAGAAATAGGGTTAGTGCTAATTTAAAGAGATGCATACAGGCAACAAAGTCAATCGACATGGGGCGACCCATCATACAACCTGGTGTAACTGAAATAACAGATATTTCTAGATTGGCAAAACATCAATGCTCAGCTGTTGCGAAGATTTTGTTTTCTGAGATTCAGAAGACTAAAAATCGGCCGAACAATCTTGATATTTTATCAATTGCTCGCTCTGCTTGCTGCAAAGTTAGTCTTGTAGCTTCACTGGAAGAGGAATATGGATTTCTGCCTGAAAAGCTGTATTTGAAGGCAGCAAAGCTTTGCAGTGATAATAATATTGCAGTAAAATGGCACCAAGAGGGGTTTATCTGTCCTAGAGGGTGTAAGGTATTGATTGACCAAGCCTTGCACTCTCCTTTATCATCTCTTCCCAATGGTTTTGTGAGGCCAAACTCTGCAAATTTGTCAGATTCTGCAAGCAAAGAGTGGGAGGTTGATGAATTTCACTGCATCATGAATCTACATAGTTTTAAATCCGAGTCACTGCAAAAGGCTGTAATCTTGTGTGATGACATAAGCTTTGGGAAGGAGTCAATTCCAGTGATTTGTGTAGTAGATCAAGAACTTATGTATTCTCTTAGTGTGTCGAATGAACAAGATATAAACTCGTCAATGCCTTGGAAGAGCTTTACGTATGTTACAAAGCCAATGCTTGATCAATCCCTTAGTCTTGATTCGAAGACTCCACAATTGGGGTGTGCCTGCTGCCCATATTCTGCTTGCTGCCCTGAAACATGTGATCATGTATACCTTTTTGGTAATGACTATGATGATGCAAAAGACATATTTGGGAAACCGATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAGTGATATTGGAGGAAGGTTACCTTGTCTATGAGTGTAACCAGATGTGCAGATGCAATAAATCCTGTCCAAACAGAATATTGCAGAATGGAGTAAGAGTCAGATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCTGTAAGGGCTGGCGAAGCTATTCTACGTGGCACATTTGTGTGCGAGTACATTGGAGAGGTTTTAGATGTGCATGAGGCACACAACAGGCACAAGAGATATGACACAGAGAATTGCAGCTATTTCTATGATATCAATTCTCATGTTAATGATATGAGCAGATTGATTGTAGAACAGGCCCAATATGTAATTGATGCTACTAAATACGGAAACGTCTCACGGTTCATCAATCATAGCTGCGCGCCCAATCTGGTTAATCACCAAGTTCTTGTGGAGAGCATGGATTGTGAGCGTACACATATTGGTCTTTATGCAAGTCGAGATGTTGCTTTGGGTGAAGAGCTAACATTTGACTATCACTATGAGCCTATGCCTGGAAAAGGGTCTCCTTGCCTTTGTGGATCTTTGAAGTGTAAGGGACGCCTTCACTAG 4503 0.4099 MEVLPCSGVQYARESECTQHSSETAFVYQGEPNWQINGEQVKLAANPLKEPSNKMEGPQIERQGEGKQTFFYLSDCQYIGTSCCDRHVKDQKESCDCHNFKEDVISEHCLTSETSLAVVDTIESELPNNIKEGDLSLSKPAWLEGDGSVALWVKRRGKWQAGIRCARADWPLSTLRAKPTHDRKQYFVIFFPHTRMYSWADILLVRSINEFPHPITYKTHQVGLKMVKDLTVARRFIMQKLAVGMLNIIDQLHFNALTEIARDVKVWKEFAMEASRCNGYSDVGRMLLKLYNSILQHYINADWLQHSCHSWVERCQNANSADSVELLEEELVESIMWNDVKTLRDEPVQPTLGSEWKTWKHDIVKWFSTSPSLSSNKYTEPQTSDGSYQANFQISRKRPKLEVRRADTHASQVETKGLVHSITLETDHGFFKKQETLSTVVAESFKQDDVREVSMATDSSNNLANKWSEIVVEAASSDFLHTKGKESTPMTELAVSKSAEPDSKNRQCIAYIEAKGRQCVRWANEGDVYCCVHLSSRFLCSSAKAENHFPVDTPLCEGTTVLGTRCKHRALPGFSFCKKHRSYAETEQNSNLPYNALKRKHRKSYTGSEDMFCKDMVLVDVGSALQVDSVTSIGDDSLHGKSNLKKKPIPDENDRSAADTLQCIGSSVYDNENPCKEFPKHYCLYCESHLPSWLKRARNGKSRIVSKEVFTELLRDCSSSEQKVHLHKACELFYRLFKSILSVRNPVPEDVQFQWALTEASKDSGVEEFFTKVVNSEKARINLIWGFNYKMDVTSVIEEPPLLPSTTNDSLHNENAIKCKICSAEFPDDQELGNHWMDIHKNEAQWLFRGYACAICLDSFTSKKLLETHVQERHHVQFVEQCMLLQCIPCCSHFGNTEQLWQHVLSIHPDDFKPSKALDKKTVSISKDSPPKHDQGNSASLENPSENPGAVRRFVCRLCGLKFNILPDLGRHHQAAHMGPNLVSSRPTKRGVRFYAYRLKSGRLSHPRLTKGVTATSYKIRNRVSANLKRCIQATKSIDMGRPIIQPGVTEITDISRLAKHQCSAVAKILFSEIQKTKNRPNNLDILSIARSACCKVSLVASLEEEYGFLPEKLYLKAAKLCSDNNIAVKWHQEGFICPRGCKVLIDQALHSPLSSLPNGFVRPNSANLSDSASKEWEVDEFHCIMNLHSFKSESLQKAVILCDDISFGKESIPVICVVDQELMYSLSVSNEQDINSSMPWKSFTYVTKPMLDQSLSLDSKTPQLGCACCPYSACCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRVILEEGYLVYECNQMCRCNKSCPNRILQNGVRVRLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVHEAHNRHKRYDTENCSYFYDINSHVNDMSRLIVEQAQYVIDATKYGNVSRFINHSCAPNLVNHQVLVESMDCERTHIGLYASRDVALGEELTFDYHYEPMPGKGSPCLCGSLKCKGRLH* 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0147 1500 MobiDBLite consensus disorder prediction 919 946 - -
Lan6g0147 1500 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1500 - -
Lan6g0147 1500 Gene3D SET domain 1182 1481 IPR046341 -
Lan6g0147 1500 SMART c2h2final6 851 874 IPR013087 -
Lan6g0147 1500 SMART c2h2final6 817 840 IPR013087 -
Lan6g0147 1500 SMART c2h2final6 954 977 IPR013087 -
Lan6g0147 1500 SMART c2h2final6 885 908 IPR013087 -
Lan6g0147 1500 Pfam Zinc finger C2H2-type, 3 repeats 853 978 IPR040689 -
Lan6g0147 1500 ProSiteProfiles Zinc finger C2H2 type domain profile. 954 982 IPR013087 -
Lan6g0147 1500 ProSiteProfiles Zinc finger C2H2 type domain profile. 817 845 IPR013087 -
Lan6g0147 1500 ProSitePatterns Zinc finger C2H2 type domain signature. 956 977 IPR013087 -
Lan6g0147 1500 ProSitePatterns Zinc finger C2H2 type domain signature. 887 908 IPR013087 -
Lan6g0147 1500 Pfam SET domain 1356 1476 IPR001214 GO:0005515
Lan6g0147 1500 MobiDBLite consensus disorder prediction 929 945 - -
Lan6g0147 1500 ProSitePatterns Zinc finger C2H2 type domain signature. 819 840 IPR013087 -
Lan6g0147 1500 ProSiteProfiles SET domain profile. 1345 1477 IPR001214 GO:0005515
Lan6g0147 1500 ProSiteProfiles Zinc finger C2H2 type domain profile. 851 874 IPR013087 -
Lan6g0147 1500 SMART preset_2 1203 1329 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan6g0147 1500 ProSiteProfiles Pre-SET domain profile. 1265 1342 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan6g0147 1500 Gene3D Classic Zinc Finger 812 883 - -
Lan6g0147 1500 SMART set_7 1345 1483 IPR001214 GO:0005515
Lan6g0147 1500 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1500 - -
Lan6g0147 1500 SUPERFAMILY SET domain 1195 1490 IPR046341 -
Lan6g0147 1500 Pfam Pre-SET motif 1207 1337 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan6g0147 1500 ProSiteProfiles Post-SET domain profile. 1484 1500 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0147 Lan-Chr6 1044373 1055049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0147 132 1499 C2H2 Transcription Factor Family AT2G23740 49.676 0.0 1328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan6g0147 Pre-SET 9.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0147 - - gmx:100786757 2319.27