Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0129 ATGTCATCATCAAATTCCCCGTGCGCGGCGTGCAAGTTTCTGCGGCGGAAGTGCACGCAAGAATGCGTGTTCGCGCCGTATTTTCCACCGGACAACCCTCAAAGATTCGCGTACGTGCACAAGGTTTTCGGCGCCAGCAACGTGGCCAAGCTTCTCAACGAACTCACTGCGGCGCAGCGAGATGACGCCGTTAAGTCCCTCGCTTACGAAGCGGAGGCGCGTCTCCGAGACCCGGTTTATGGTTGCGTGGGTCTTATCTCCGTTCTACAACACAGGCTCAGGCAGATCCAAATGGAGCTTAGTAATGCAAAGAAGGAACTCGCTACTTATATTGGACCCCATGCTCTTCAAGGCATGCCTACCACCGCCACTCTTCAACACCATCACCTCGCCGTTGCCGCCAACCCTTTTACCTCCTCCGTCTCACCCGCTGCGCACGGTGGTCCGTTATTGCTTCGCGAATCTCAGCCTCCACAACATCAGATATTGGAGGCTCAGCAATTGGGTGCAAGAGAGCATCAAGAGATGTTTAGGGGTTTTGAGCATCAACAACAGCAGCAACAAGAGTTTCTAAGGTTCAATAATGGTGGATTCGATTTGGGTTCAGTTCCTGGTAGTGGGTTCAGCCAGCAGGTTTCACCAGATGCTCCTGTTTCTGATGATCACTTATCACCTTCATTGGCTTTGGGATCCTTTGAGAACCCTTTTCATCATATGCAGCAACCACAGCAAGTAGAACATCATGCACATCATCTTCCTCTTGAGGCACAACTACTTCTCCCACCCCAGCAGGAAAAGCAGGTGCATCAGCAACAAACCCAGCAGTCACAATTGCAACACCAACATCACCAGCAACAGTTGGAAAGGGATGAGTGTAGGAGTGTGGGCCCATCTTGTTGA 900 0.5156 MSSSNSPCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELTAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLRQIQMELSNAKKELATYIGPHALQGMPTTATLQHHHLAVAANPFTSSVSPAAHGGPLLLRESQPPQHQILEAQQLGAREHQEMFRGFEHQQQQQQEFLRFNNGGFDLGSVPGSGFSQQVSPDAPVSDDHLSPSLALGSFENPFHHMQQPQQVEHHAHHLPLEAQLLLPPQQEKQVHQQQTQQSQLQHQHHQQQLERDECRSVGPSC* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0129 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-RELATED 1 253 - -
Lan6g0129 299 MobiDBLite consensus disorder prediction 202 233 - -
Lan6g0129 299 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lan6g0129 299 Coils Coil 86 106 - -
Lan6g0129 299 MobiDBLite consensus disorder prediction 262 299 - -
Lan6g0129 299 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Lan6g0129 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 253 - -
Lan6g0129 299 MobiDBLite consensus disorder prediction 263 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0129 Lan-Chr6 924934 926815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0129 1 223 AS2 family AT5G66870 55.823 3.52e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan6g0129 LOB 1.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0129 - - lang:109348649 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0296 17 2064028 2068000 Lan6g0129 6 924934 926815 LSH
Lan18g1017 18 15223718 15226264 Lan6g0129 6 924934 926815 LSH