Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0128 ATGCGTTGGTTTTCAACTCTCATCTTCTCTCCTTCTTCCTCATCTTCTTCCTCTGCCCATTCTTCTTCCTCCGACGCTGCCACACCTACACGCGGTTTATGGGTGTTTTGGACCGGGAAGAGATCGAGGCGATCGAGGAAGCTTCAGCAATTGGGTGATCACGTTGGAAATGGAAAGTCACATCCTATGTGGCATGAAACCGTGGATGATATCGTCGTGACTCATCCTACGTCTTTGTCTCGTTCTCCCAGCGTGGTTTCTCGTTCTTCTACGAGTAGTTTTGACCGTTGCTATAACCGCTCCACTTCGGTTGCGCCTCAGCCGTTGCCCTTGCCGGAATTGGTCTCCTCCGCCGTGCTCCGCAATAATAGAGACGCTGATAGCCGTTTGCCGTCACCTAAATATGCAGTGGGCCCCACCTCTGTTTCCAAAGCCACACAAGTTGATGGTGCCGTTGACGCTTTCTCCTCCACTGGTTTTCGCATGCGCAGTGTTTTTGCTAGCCAAAAAAAGAATAAGGAGCAAGTTGAAACAAGGACACCTGGGATGGCGACTCAAGATACAAATGGTGCAGCAAGCACAAGATCAGATTCGAACTTCTGGATTAGTGTCCCAGCAAGGAGTGTTCCAAGTAGTCCTTTTGGAAGTCCCACAATCAAACCACATATAACAAGAAACGAAGACTTTGTGCCATATCATTATGTGACACCAAAAACAAATCAATTCTGGTCTGCACCAGAAATGCCAAAATATGAAACACTAGCAGGGTTGCCACTTCCTGCATTCTTTGATTTATCTTCATTAGGCAGCACTATTAATAATAACAGTACATATTCTCCACATCAAAGTCCAAGGGGAACAAGTCCATGCCAACAACAACACCCTAAAAGCCCATCAACTAGGTCTTCTTCACCCATGCCCCGTCGCGAAAATATTGCTCCTCTAACTGTCCACCCCTTACCCTTGCCTCCTTGGGCTGGTTCCGGGGCCGGGGCTGGCTCAGCCTTACCTTCACCATCTTCTACCTATACTCAACCTGGCACTAAGACAGAACCATTGTCAATGAAATCCAAATGGCAAAAAGGGAAACTCATTGGCCGAGGCACTTTTGGAAGTGTTTATGTTGCCACCAATAGAGAAAATGGAGCATTGTGTGCAATGAAGGAAGCAGAGATATTTTCTGATGATCCAAAGTCTGCAGAGTGTATAAAGCAGTTAGAGCAGGAAATTAAAGTCCTTAGCCATCTGAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAATAGTTGAAGACAAGTTTTATATTTTTTTGGAATATATCCATCCTGGTTCAATAAATAAATACGTCCGAGACCATTGTGGTGCGATAACAGAATCTGTTGTTCGAAGTTTCACTCGCCATATTCTTTCAGGGCTAGCTTACCTGCACAGTAAAAAAACAGTTCATAGGGACATCAAGGGAGCTAACTTGCTTGTTGATTCTGCTGGAGTTGTTAAACTTGCAGACTTTGGCATGGCCAAGCATCTAACTGGACATTCAGCTGATCTTTCTCTGAAGGGAAGTCCATATTGGATGGCCCCAGAGCTTATGCAAGCAGTTATGCAAAAGGATAACAGCTCTGATCTAGCTTTTGCTGTTGATATATGGAGTTTGGGTTGTACAATTATTGAAATGTTCACGGGGAAGCCTCCTTGGAGCGAGTATGAAGGAGCCGCAGCTATGTTTAAGGTTATGAAGGATACCCCTCCTATACCTGAAACATTGTCACCAGAGGGTAAAGATTTCCTGAGGCTCTGCTTTAAAAGAAATCCAGCCGAGCGCCCAACTGCTTCGATGTTGCTAGATCATCGATTTTTGAAGAACAACTTGCAACAGCAGGATATTTCATCTGAGAGTGGTGGCACAGTATCCTTCTCACTCTACTCTTGA 1932 0.4513 MRWFSTLIFSPSSSSSSSAHSSSSDAATPTRGLWVFWTGKRSRRSRKLQQLGDHVGNGKSHPMWHETVDDIVVTHPTSLSRSPSVVSRSSTSSFDRCYNRSTSVAPQPLPLPELVSSAVLRNNRDADSRLPSPKYAVGPTSVSKATQVDGAVDAFSSTGFRMRSVFASQKKNKEQVETRTPGMATQDTNGAASTRSDSNFWISVPARSVPSSPFGSPTIKPHITRNEDFVPYHYVTPKTNQFWSAPEMPKYETLAGLPLPAFFDLSSLGSTINNNSTYSPHQSPRGTSPCQQQHPKSPSTRSSSPMPRRENIAPLTVHPLPLPPWAGSGAGAGSALPSPSSTYTQPGTKTEPLSMKSKWQKGKLIGRGTFGSVYVATNRENGALCAMKEAEIFSDDPKSAECIKQLEQEIKVLSHLKHPNIVQYYGSEIVEDKFYIFLEYIHPGSINKYVRDHCGAITESVVRSFTRHILSGLAYLHSKKTVHRDIKGANLLVDSAGVVKLADFGMAKHLTGHSADLSLKGSPYWMAPELMQAVMQKDNSSDLAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSPEGKDFLRLCFKRNPAERPTASMLLDHRFLKNNLQQQDISSESGGTVSFSLYS* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0128 643 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 630 - -
Lan6g0128 643 SUPERFAMILY Protein kinase-like (PK-like) 340 626 IPR011009 -
Lan6g0128 643 MobiDBLite consensus disorder prediction 1 27 - -
Lan6g0128 643 MobiDBLite consensus disorder prediction 273 309 - -
Lan6g0128 643 MobiDBLite consensus disorder prediction 334 353 - -
Lan6g0128 643 Gene3D Transferase(Phosphotransferase) domain 1 355 637 - -
Lan6g0128 643 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 630 - -
Lan6g0128 643 SMART serkin_6 359 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0128 643 MobiDBLite consensus disorder prediction 178 196 - -
Lan6g0128 643 MobiDBLite consensus disorder prediction 273 353 - -
Lan6g0128 643 ProSiteProfiles Protein kinase domain profile. 359 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0128 643 MobiDBLite consensus disorder prediction 6 27 - -
Lan6g0128 643 Pfam Protein kinase domain 360 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0128 643 MobiDBLite consensus disorder prediction 171 196 - -
Lan6g0128 643 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0128 Lan-Chr6 912736 918498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0128 193 625 MAP Kinase Kinase Kinase AT5G66850 64.114 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan6g0128 Pkinase 1.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0128 - - cam:101502514 764.222