Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0118 ATGGCGTCGATTCCTCCATCTCCCGCCTCTTCTTCTAGATCAGAACCTCTCATCGACCCCTCTACAAGAAAAGTGGATGATGCAAGTCCCACTGTTAAAGACGTGTTACTGGTTATTGATTCATTAAAGAAACATGTTGCTGCTGAGCGGGTTGTTTCCGTAAAGAAAAGAATGGAAGAAAATAGACAGAAGTTGATTGGTGTCACAAACCATCTGTACAACATGTCTATGGACAAAAGGACCTACAGCGTTACTGATTCACATAGAAGTTTGGACCTACTGACAAAGAGGCAAAAAGAAGCAATTGATATGCACAATGGTGTTCATGAAAGTCCTGGTGATAGGGAGAGCAATGGCTACCTTGAAGACAACCATGGTTCTACAGCAGTTCTTCTAGGATCTAATGTTGCTGTAAAGAATGCTGTTCGCCCTATCAAGTTACCTGCAGTAACAAGATTACCTCCTTACACCACATGGATTTTTCTAGACAGGAATCAAAGAATGACAGAGGATCAGTCAGTGGTGGGTCGAAGACGAATTTATTATGACCAAAATGGTGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAAGTGATGGAGGATGAAGAGGAGAAAAGAGAATTTGTAGAATCAGAAGATTATATACTTCGCATGACTATCAAAGAAATTGGTTTATCTGATATTGTTCTGGAGTCGCTGGCACAATGTTTTTCTAGAACCGCCAGTGAAATTAAGGCAAGATATGAAACTTTTAGTAATGAAGACAATGCTGGTGGGGGTTCCAAGAATGGAAATACTGAAGATAATTCTCAACATGGAAATTCTTTTCTGGAAAAGGATCTTGAAGTAGCTCTTGACTCTTTTGACAACCTTTTTTGCCGACGATGTCTTGTTTTTGATTGCAGGTTACATGGATGTTCACAGGATCTTGTCTCTCCTGCTGATAAGCTACCTATGTGGATCCTTCCTGATACTGAAACTGCACCTTGTGGGCCAAATTGTTTTCAATTGGTACTTAAATCAGAAAGGTTTGTTAAAGCTTCCTCTTCTGGCCATGCGGGTGCAGAAGAGAAATGCTCTGGTGGTTCTTCATCAAGGAAGAAGTCTTCTGCTAGAAGGCAGATGAAATGCAGCCAAAGTGAAGGTGCTTCATCTAATGCAAAGAACATTTCTGAAAGTAGTGACTCAGAGAATGGTCCCGGGAGGGACCCTGTTTCAGTTTCCCATTTGCCACTGCCAAAATCTAAACCTGTGGGGAGAGGTGGAATCACTAAAAGGAACAGTAAACGAGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAGCGGCAGAAGAAAACAGTGGCTTCTGATTCTGGTTCCATCGGTGAAGCTATTGACCGACCATCTAATGATATGGTTAATACTGACTCGCCTGTCATGAGCAGTGAAGACAACATGAGGAAGGAAGGGTTAGTGGATGAAAACATTTGTAAACAAGAATACACAGATAATAAATCTTGGAGAGCTCTTGAAAAAGGGCTTCTGGAGAAAGGAATGGAGATTTTTGGTAGAAACAGCTGCTTAATAGCCAGGAATCTCTTAAATGGTGTAAAGACATGTTGGGATGTATTCCAACACATTAATTGCGAAGATGGAAAGATGTCAGGTCCTGGTGGTGATGCTGCAAATTCATTCGTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGGCGAAGGTCAAGATTTTTACGTAGAAGAGGAAGAGTTCGTCGATTGAAGTATACCTGGAAATCTGCTGCCTATCATTCAATTAGGAAAAGGATTACTGATAAGAAGGATCAGCCCTGCCGGCAGTACAATCCTTGTGGTTGCCTAACAGCTTGTGGAAAGCAGTGCCCTTGTCTTTTAAATGGAACTTGCTGTGAGAAGTATTGTGGGTGCCCCAAGACTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCCGAAGCCGTCAATGTCCATGCTTTGCGGCAGATAGAGAATGTGATCCAGATGTCTGTAGGAATTGTTGGGTTAGTTGTGGTGATGGTACTCTTGGAATTCCTAGCCAAAGAGGTGATAATTATGAATGTAGGAACATGAAACTTCTTCTTAAACAACAGCAGAGGGTTCTTCTTGGAAGATCTGATGTATCTGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGCCAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCTCATCGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTACCGTAAAGGTGACAAATTGAAGTTTGCGAACCATTCTCCTGATCCCAATTGCTATGCAAAGGTTATTATGGTTGCTGGGGATCATAGGGTAGGCATTTTTGCCAAGGAACGGATCGGTGCTGGGGAGGAACTGTTTTATGATTATCGATATGAGCCCGACAGGGCTCCTGCTTGGGCCCGGAAGCCAGAGGCATCTGGCTCAAAAAAAGATGATGGTGCCCCCTCAAATGGTCGTGCAAAGAAGCTTGCTTAG 2589 0.4245 MASIPPSPASSSRSEPLIDPSTRKVDDASPTVKDVLLVIDSLKKHVAAERVVSVKKRMEENRQKLIGVTNHLYNMSMDKRTYSVTDSHRSLDLLTKRQKEAIDMHNGVHESPGDRESNGYLEDNHGSTAVLLGSNVAVKNAVRPIKLPAVTRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEVMEDEEEKREFVESEDYILRMTIKEIGLSDIVLESLAQCFSRTASEIKARYETFSNEDNAGGGSKNGNTEDNSQHGNSFLEKDLEVALDSFDNLFCRRCLVFDCRLHGCSQDLVSPADKLPMWILPDTETAPCGPNCFQLVLKSERFVKASSSGHAGAEEKCSGGSSSRKKSSARRQMKCSQSEGASSNAKNISESSDSENGPGRDPVSVSHLPLPKSKPVGRGGITKRNSKRVAERVLVCMQKRQKKTVASDSGSIGEAIDRPSNDMVNTDSPVMSSEDNMRKEGLVDENICKQEYTDNKSWRALEKGLLEKGMEIFGRNSCLIARNLLNGVKTCWDVFQHINCEDGKMSGPGGDAANSFVEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITDKKDQPCRQYNPCGCLTACGKQCPCLLNGTCCEKYCGCPKTCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVAKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERIGAGEELFYDYRYEPDRAPAWARKPEASGSKKDDGAPSNGRAKKLA* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0118 862 Gene3D SET domain 613 830 IPR046341 -
Lan6g0118 862 MobiDBLite consensus disorder prediction 836 855 - -
Lan6g0118 862 MobiDBLite consensus disorder prediction 1 18 - -
Lan6g0118 862 SMART CXC_2 647 684 IPR033467 -
Lan6g0118 862 ProSiteProfiles CXC domain profile. 599 698 IPR026489 -
Lan6g0118 862 MobiDBLite consensus disorder prediction 1 27 - -
Lan6g0118 862 MobiDBLite consensus disorder prediction 448 477 - -
Lan6g0118 862 Coils Coil 193 213 - -
Lan6g0118 862 SMART sant 205 255 IPR001005 -
Lan6g0118 862 SMART sant 497 547 IPR001005 -
Lan6g0118 862 Pfam SET domain 724 827 IPR001214 GO:0005515
Lan6g0118 862 SMART set_7 713 834 IPR001214 GO:0005515
Lan6g0118 862 MobiDBLite consensus disorder prediction 351 427 - -
Lan6g0118 862 MobiDBLite consensus disorder prediction 253 274 - -
Lan6g0118 862 MobiDBLite consensus disorder prediction 836 862 - -
Lan6g0118 862 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 9 862 IPR025778 GO:0031519
Lan6g0118 862 ProSiteProfiles SET domain profile. 713 828 IPR001214 GO:0005515
Lan6g0118 862 SUPERFAMILY SET domain 587 833 IPR046341 -
Lan6g0118 862 MobiDBLite consensus disorder prediction 376 402 - -
Lan6g0118 862 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 457 860 - -
Lan6g0118 862 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 17 456 - -
Lan6g0118 862 MobiDBLite consensus disorder prediction 255 273 - -
Lan6g0118 862 Pfam CXC domain 651 682 IPR041355 -
Lan6g0118 862 CDD SET_EZH 713 829 - -
Lan6g0118 862 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 457 860 IPR045318 GO:0006338|GO:0018024
Lan6g0118 862 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 17 456 IPR045318 GO:0006338|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0118 Lan-Chr6 825392 834242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0118 702 831 C2H2 Transcription Factor Family AT2G23740 27.211 4.04e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan6g0118 SET 2.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0118 - K11430 gmx:100809840 1461.05