Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0107 ATGAACACATCCATTACCAGAAAAGATATGGATCGGATCAGGGGCCCATGGAGCCCAGAAGAGGACGCTTCTCTTCAAAATCTCGTAGAGAAACACGGGCCTAGGAATTGGTCACTCATCAGCAAATCCATTCCAGGTCGATCTGGAAAATCATGCAGGCTCCGTTGGTGCAACCAGCTCTCTCCTCAGGTTGAACATCAGGCTTTCACACCTGAAGAGGACGAAACAATAATCAGAGCCCATGCCCGATTCGGAAACAAATGGGCCACCATAGCCCGACTCCTATCAGGCCGAACCGACAACGCAATCAAAAACCACTGGAACTCCACCTTGAAGCGCAAGTGCGCTTCCTTCATGATTGACGAGCTTGAGGTTAATCCTCAGCCGTTGAAACGTTCCGTGAGTGCTGGCGCTGCTATGCCCGTGTCCACGGGACTTTACATGAACCCGCCCACACCTGGTAGCCCATCTGGATCCGATGTGAGCGAGTCCAGCGTACCGGTTGCGTCCTCATCACACGTGTACCGACCTGTTCCAAGAACTGGTGGAGTTTTAATAGAAACGACGTCGTCCTCCAATGATCCACCTACTTCATTATCTCTCTCCCTTCCTGGTTTGGACTCTTCTTCTGAAGTCTCGAATCGTGTAACGGTGTCTGATTATAGCGCTTCTGCGCCGATACAGTTGAATACGGCGTCCTTGTTATCACCGATAATGGCTGAGCCGGTGTCTACGGTAGCTCCGATGGAGGTGCGTCAGAAGGAGGTTCATGATCTGAGGTCGATGGCGGCGTTTAATTTTAACGGAGAGTTGTTGGCGGTGATGCAGGAAATGATAAGAAAGGAAGTGAGGAGTTATATAGAGGAACAGAATGGGATGTGTTTTCAAGCAGCTGGTGATGGGTTTAGGAACGCATCGGTGAAGAGTATTGAGAAACAGGATCGATTCGTAAATATTAGCTGA 963 0.4984 MNTSITRKDMDRIRGPWSPEEDASLQNLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHQAFTPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASFMIDELEVNPQPLKRSVSAGAAMPVSTGLYMNPPTPGSPSGSDVSESSVPVASSSHVYRPVPRTGGVLIETTSSSNDPPTSLSLSLPGLDSSSEVSNRVTVSDYSASAPIQLNTASLLSPIMAEPVSTVAPMEVRQKEVHDLRSMAAFNFNGELLAVMQEMIRKEVRSYIEEQNGMCFQAAGDGFRNASVKSIEKQDRFVNIS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0107 320 MobiDBLite consensus disorder prediction 184 207 - -
Lan6g0107 320 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Lan6g0107 320 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Lan6g0107 320 Gene3D - 13 65 - -
Lan6g0107 320 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lan6g0107 320 CDD SANT 68 111 IPR001005 -
Lan6g0107 320 Gene3D - 67 131 - -
Lan6g0107 320 SMART sant 65 113 IPR001005 -
Lan6g0107 320 SMART sant 13 62 IPR001005 -
Lan6g0107 320 MobiDBLite consensus disorder prediction 145 207 - -
Lan6g0107 320 Pfam Myb-like DNA-binding domain 17 75 - -
Lan6g0107 320 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 6 287 - -
Lan6g0107 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Lan6g0107 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Lan6g0107 320 MobiDBLite consensus disorder prediction 148 171 - -
Lan6g0107 320 PANTHER MYB PROTEIN-RELATED 6 287 - -
Lan6g0107 320 CDD SANT 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0107 Lan-Chr6 726703 728229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0107 6 289 MYB Transcription Factor Family AT4G37260 55.442 3.48e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan6g0107 Myb_DNA-bind_6 6.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0107 K09422 - gmx:780556 380.563