Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0100 ATGGAGAACAAGGAGGAAGATGTGAAAGTTGGAGCAAGTAAATTCACAGAGAGACAAGCATTGGGTACAGCAGCTCAAGGTGACAAGGACTACAAAGAAGCACCACCAGCACCATTGTTTGAACCAGGAGAACTCAAATCTTGGTCTTTCTATAGAGCTGGGATTGCTGAGTTTGTAGCCACTTTCTTGTTCCTTTACATAACTGTTTTAACTGTCATGGGTGTTAATAGATCACCCTCTAAGTGTTCCTCTGTTGGCATTCAAGGCATTGCTTGGGCTTTTGGTGGTATGATATTTGCTCTTGTTTACTGCACTGCTGGAATATCAGGTGGACACATAAACCCTGCAGTGACCTTTGGTCTATTTTTGGCAAGGAAGCTATCCCTGACAAGAGCATTATTCTACATTGTGATGCAGTGTCTTGGAGCTATCTGTGGTGCTGGTGTGGTTAAGGGCTTTGAGGGTAATGCTAGGTATGAGTTGTTCAAAGGTGGTGCTAACTTTGTGAACCCTGGATACACCAAGGGTGATGGTCTTGGAGCTGAGATTGTTGGCACTTTTGTTCTTGTCTACACTGTCTTTTCTGCCACTGATGCCAAAAGAAATGCTAGAGACTCTCATGTTCCTCTGCTGGCCCCTCTTCCCATTGGGTTTGCTGTGTTCTTGGTCCACTTGGCCACCATTCCAATTACTGGAACTGGCATTAACCCAGCTAGGAGTCTTGGTGCTGCTATTGTCTTCAACAGAGACCTTGCATGGGATGATCATTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCCCTTGCTGCTGTATATCACCAAATAGTTATCCGAGCAATTCCTTTCAAGACAAGAGGCTAA 864 0.4491 MENKEEDVKVGASKFTERQALGTAAQGDKDYKEAPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVNRSPSKCSSVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFEGNARYELFKGGANFVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNRDLAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKTRG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0100 287 Gene3D Glycerol uptake facilitator protein. 37 285 IPR023271 -
Lan6g0100 287 TIGRFAM MIP: MIP family channel proteins 56 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0100 287 SUPERFAMILY Aquaporin-like 44 279 IPR023271 -
Lan6g0100 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 3 285 IPR034294 -
Lan6g0100 287 MobiDBLite consensus disorder prediction 1 33 - -
Lan6g0100 287 Pfam Major intrinsic protein 44 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0100 287 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Lan6g0100 287 CDD MIP 52 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0100 287 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0100 287 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0100 287 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0100 287 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0100 287 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0100 287 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0100 287 PANTHER PLASMAMEMBRANE INTRINSIC PROTEIN 13 3 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0100 Lan-Chr6 664744 667198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0100 1 286 Major Intrinsic Protein MIP AT3G61430 84.965 7.64e-174 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0100 K09872 - gmx:121174914 555.444