Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0098 ATGGCATGGTGGTGGAGAACATTTACATCCAAAAAAGCAAAGAAGGAAAAGAAAGGGAAGAGTAGTGTTGATAAGATACAACTGAAAATAAAATTGTCTTGTGAAGAGAAATGCAATGATAAATCAATAGAATCTAAGAGACATAGCATTGACACAATCCCAAAGAAGAAATCTCGACCCCAAAAAGTCCCTTCAAGATCAATATCACTCTCTACAATTATTATTATTTGTTCTAAAATAAATGCACGAATGCACCATACTCATCCCCTCTCGTTGCCATTGTTAGAGTTGCACAATCATTTAACATCAAAACTAGGAAGTACTAGAGCCTCAAAACCTCGTCATGTTTCAAAAAGGAAAGAACCTATAGCATTACTTTCTAGTTCCAGCAATGATAACAATAGTGATATTATTATACATGATCCACTTTCTAGTTCTAGCCATGGAAACAAAATCACCAGTGTGGCTTGCAATGATAAGTTGTTGACTACTACTACTACTACCCAAAAAAGCTTAATACCATCATCCACCACACCAACACCTCAATTATGCAATAATGAAATCTTACCTAAACTATCCAAAAAGGGTGTCACACAACTACAAAATCTGCAAATAATACCTCGTCGAAGTGGTTTTTGGAGTCCCACAAAAAATACAATAATAAGTTCTTCTAGAAGTCCAACGAGAAGAACATTTGGTCATGATCAGCATGTTTTGAATTCTGGATTCTGTTCATCAAAGCCTTATCCTGATATAGATTCTTGGCACTACTCTAGCCTGCGTTCAGTTCATAATATTGGGCATGATTTATTTGGTGGGGATTTGAAAAGAGATGTATTTTGGACACACAATAGGTGCAACCTTGAGTCTTCTCCAATATCTAGTTCCAGAAAGATAAGCCCCAACCTCAATTCTAGGATACAAAGTGAAGCAGTTACCCCTCTTCATCCATTAGCAACACATAATGGTTTACTATTTCCTACATCTTATTCTACTGTGCAAGCTTCTTCTCCCCACAGTCCTGGTTCAGGTATTCTAACACGCCCTTCAAAATGGAAAAAAGGTCGGTTTCTTGGACAAGGAACGTTTGGACAAGTTTTTGTGGGTTTTAACAGTGATAGTGGTCTGATATGTGCAATGAAGGAGGTAACCCTTTGTCCAGATGATCCTAAATCAGTAGAAAGTGCAAAACAACTTCGCCAAGAAGTGGCTTTGCTTAGTAACTTGCGGCATCCAAATATAGTACGCTTCTATGGATCTGAGATGGTAGGTGACAAACTTTATATATACTTGGAATATGCTGCTGGTGGGTCAATATATACGTTGCTTCAACAATATGGTCAGCTTGGTGAATCTGCCATTCGTTCTTATACTAGACAAATTTTGTCCGGTCTTGCATATTTACATGCCAAATGCATTGTTCATAGGGACATCAAAGGAGCAAATATATTGGTGGATCCTAATGGGACTGTGAAATTGGCAGATTTTGGGATGGCCAAATATATAGGTCGTAATCCTTGCCAATTCTCTTTAAAAGGAAGTCCTCATTGGATGGCACCAGAGATTATCATAAATCCAAGTCGTTGTAATGTTTCTGTTGATATATGGAGCCTTGGTTGCACCATTTTGGAGATGGCTACAACAAAACCACCTTGGAGCCAATATGAAGGGGTTGCTGCTATGTTCAAACTCGGGAACACTGAAGAAATTCCTCTAGTCCCAGATTATCTATCAGAAGAAGGAAAAGACTTTGTCAACCTTTGTTTGCAAAGAGATCCACAGTGTCGTCCCTCAGCTTCACAGCTTTTGTTGCATCCTTTTGTCAAAAATTTCAAACTAGAAAGATCAATTCAGGGCATTGGACCATATAAACTTGATTCATACTTACATTCAAAAGCAAGTGATATCAATCTGTCAAGAAATAGTTCGGGATCAAGGTCTTTCTCTCATACCCACATAATCAATCTTCATTGA 1974 0.3794 MAWWWRTFTSKKAKKEKKGKSSVDKIQLKIKLSCEEKCNDKSIESKRHSIDTIPKKKSRPQKVPSRSISLSTIIIICSKINARMHHTHPLSLPLLELHNHLTSKLGSTRASKPRHVSKRKEPIALLSSSSNDNNSDIIIHDPLSSSSHGNKITSVACNDKLLTTTTTTQKSLIPSSTTPTPQLCNNEILPKLSKKGVTQLQNLQIIPRRSGFWSPTKNTIISSSRSPTRRTFGHDQHVLNSGFCSSKPYPDIDSWHYSSLRSVHNIGHDLFGGDLKRDVFWTHNRCNLESSPISSSRKISPNLNSRIQSEAVTPLHPLATHNGLLFPTSYSTVQASSPHSPGSGILTRPSKWKKGRFLGQGTFGQVFVGFNSDSGLICAMKEVTLCPDDPKSVESAKQLRQEVALLSNLRHPNIVRFYGSEMVGDKLYIYLEYAAGGSIYTLLQQYGQLGESAIRSYTRQILSGLAYLHAKCIVHRDIKGANILVDPNGTVKLADFGMAKYIGRNPCQFSLKGSPHWMAPEIIINPSRCNVSVDIWSLGCTILEMATTKPPWSQYEGVAAMFKLGNTEEIPLVPDYLSEEGKDFVNLCLQRDPQCRPSASQLLLHPFVKNFKLERSIQGIGPYKLDSYLHSKASDINLSRNSSGSRSFSHTHIINLH* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0098 657 SUPERFAMILY Protein kinase-like (PK-like) 339 638 IPR011009 -
Lan6g0098 657 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 328 - -
Lan6g0098 657 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 327 619 - -
Lan6g0098 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Lan6g0098 657 ProSiteProfiles Protein kinase domain profile. 352 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0098 657 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 327 619 - -
Lan6g0098 657 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 328 - -
Lan6g0098 657 SMART serkin_6 352 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0098 657 Gene3D Transferase(Phosphotransferase) domain 1 349 640 - -
Lan6g0098 657 Pfam Protein kinase domain 353 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0098 657 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0098 Lan-Chr6 660214 663426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0098 1 617 MAP Kinase Kinase Kinase AT1G63700 43.777 3.06e-158 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan6g0098 Pkinase 8.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0098 K20717 - vvi:100263296 525.783