Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0094 ATGATCATTTCCGAGAAGAACCGTAAGGAGATCAGCAAATACCTCTTCCAAGAGGGAGTTTTGTATGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAAATAGATGTGCCAAATCTGCAGGTTATTAAGCTGATGCAGAGTTTCAAATCAAAGGAGTATGTGAGAGAGACATTTGCATGGATGCACTATTACTGGTTCCTCACTAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTCCCTTCAGAGATTGTCCCTGCCACTCTTAAAAAGCAGGCTAAGCCAGCTGGCAGACCCTTTGGAGGTCCACCCGGTGATCGCCCTAGGGGCCCACCACGCTTTGAAGGAGAAAGGAGATTTGGGGGTGACCGTGATGGATATCGTGGAGGTCCCCGAGCACCCGGTGGTGAATTTGGAGGAGAAAAGGGTGGAGCTCCTGCTGACTACAGACCATCTTTTGGGGGTCCTGGTGGAAGGTCTGGCTTTGGTCGTGGTGCAGGTGGTTATGGAGCACCATCTAATACAAATGCTTAA 540 0.4907 MIISEKNRKEISKYLFQEGVLYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPRAPGGEFGGEKGGAPADYRPSFGGPGGRSGFGRGAGGYGAPSNTNA* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0094 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
Lan6g0094 179 Gene3D - 1 104 IPR036388 -
Lan6g0094 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 173 IPR037447 -
Lan6g0094 179 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 173 - -
Lan6g0094 179 MobiDBLite consensus disorder prediction 92 179 - -
Lan6g0094 179 MobiDBLite consensus disorder prediction 112 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0094 Lan-Chr6 628245 630263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0094 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 83.226 2.42e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0094 K02947 - csv:101212088 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0120 17 698361 703400 Lan6g0094 6 628245 630263 LSH
Lan18g1114 18 16147456 16149284 Lan6g0094 6 628245 630263 LSH