Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0090 ATGGAACAAAAGAATATATTGATATCTGCACTGAGTGCTGGTGTGGGTTTGGGAATTGGGTTGGCCTCTCGACAAAGAGTTTCAAAATGGGGACAAAACAAAAACAACACAAACTCCATTACTCCACATAATATTCAGCACGAAATGCTAAGTTTAGTTGTTGATGGCAGAAACACCAACGTCACTTTTCATAATTTCCCTTATTATCTCAGTGAGCAGACAAGGGTGTTGCTAACAAGTGCTGGTTATGTCCATTTAAAGCACGCCGAAGTTTCTAAATATACGAGGAACCTTGCTCCTGCGAGCCGGACTATTCTACTCTCAGGGTCAGCTGAACTTTACCAACAGGTGCTTGCCAAGGCCTTAGCACACTACTTTGAGGCCAAATTGCTTCTATTAGATTTAACTGACTTTTCATTGAAGATTCAGAATAAATATGGCTCTTCTGGAAACAGAGAATCTGCTTTCAAAAGGTCTACTTCAGAGTCAACTTTGAATCAGTTATCTGACCTGTTTGGATCATTTTCAATCTTTCCACAGAGGAAGGAGTCTAAAGTTGCAGGAAAAATGCATAGGCAAAGCAGTGGAGTGGACCTTCAGTCAATAGAAGCTGAAGGATCTTGTAATCCTCCTAAGCTTCGTTGGAATGCGTCTGCCTCGGCAAATATGAGCACCCTTGCTTCTCAAAGCAATCCTACAAATTCAGCTCCTCCGAAGCGCACGACCATATGGTCCTTTGATGAAAAGCTTCTTATACAGACACTTTACAAGGTTCTAGGTTATGTGTCAAAAACCTATCCCATTGTGCTATATATGCGGGATGTTGATAAGATGTTAAATAGATCACAAAGGATATATAACCTTTTCCAGAAAATGTTGAAGCAAATATCCGGACCAATTTTGGTTCTTGGTTCAAGAGTTCTGGATTCGGGTGATGACTACAAAGAAGTTGATGAGAAGCTAACTTCGCTCTTCCCGTACAACATAGAAATCAGGCCTCCAGATGATGAATCACAGCTTGTCAGCTGGCAGACCCAGTTCGAAGAGGATATGAAAATGATAAAGGCTCAAGATAACAGAAACCATATCATGGAAGTGCTTGCAGCCAACGACCTTTATTGTGACGACCTGGATAGCATCTGCGTGGCAGACACAATGGTTCTCAGTAGCTGTATACAAGAGATTGTTGTCTCGGCAATTTCCGATCATTTAATGAATGGCAAAGATCCTGAATACAGAAATGGGAAACTTGTTATTTCATGCAATAGTTTGTCCCATGCATTAGATATATTCCAGGAGGGAAAATTCATTGGAAGAGATACATTAAAATTAGAAGCTCAAGGAAAAGTAACACCTGAGCAAAGAGAGGATGGAGCTGTTGAGAAACCTGAAGCAAAGTCTGAAAATCCTGCTCCTGCGATAAAGGCTGAAGCTGGAATATCAACTTCAGAGGGTAACACTCAAGTTCCTCCGGATAATGAGTTTGAGAAGCGAATTAGGCCTGAGGTAATACCCGCAAATGAGATTGGTGTAACATTCTCCGACATTGGTGCTTTAGACGACACCAAACAATCCCTTCAAGAACTTGTAATGCTTCCTCTGCGGAGGCCAGACCTTTACGCTGGAGGACTTTTAAGTCCTTGTAGAGGAATATTGCTATTTGGGCCTCCTGGCACAGGGAAGACAATGCCGGCAAAGGCCATTGCAAATGAGGCTGGAGCAAGTTTCATTAATGTATCCATGTCTACCATCACTTCTAAATGGTTTGGTGAGGATGAGAAGAATGTACGTGCTTTATTCACACTTGCAGCCAAGGTCTCTCCAACCATTATATTTGTAGACGAGGTTGATAGTATGCTTGGGCAACGGACCAGAGTCGGAGAGCATGAAGCCATGCCGAAAATTAAGAACGAATTTATGTCTCATTGGGATGGGCTTATGACAAACAAAGGGGAGCGCATCCTTGTTCTTGCTGCAACTAATAGGCCCTTTGACCTAGATGAAGCAATCATAAGGCGATTTGAAAGGAGAATTATGGTGGGGCTACCATCTATGGAGAACAGAGAAAAGATTTTGAGGACTCTTTTGGAAAAAGATAAGGTGGACGAGGGACTTAATTTTAAGGAACTTGCAACTATGACAGAAGGATATAGTGGAAGTGATCTAAAGAACTTGTGCACAACTGCTGCTTATAGACCAGTTAGGGAGTTGATTCAGCAAGAGATACTAAAGGATCAGAAGAAACGGCAATCTACAGTAGAAATTACCCAAGGTTCTATGGATACAAAAGAGGAATTTAAACTGGAAAGAGTTATTAACCTTAGGCCTTTGAATATGCAGGACTTCAAAGAAGTAAAGAAACAGGTTGCTGCAAGCTATGCAGCTGAGGGGGCTGGAATGAGTGAGTTGAAGCAGTGGAACCAGTTGTATGGGGAAGGTGGCTCAAGGAAGCAAGAGCAGTTATCTTACTTCCTATGA 2478 0.4193 MEQKNILISALSAGVGLGIGLASRQRVSKWGQNKNNTNSITPHNIQHEMLSLVVDGRNTNVTFHNFPYYLSEQTRVLLTSAGYVHLKHAEVSKYTRNLAPASRTILLSGSAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQNKYGSSGNRESAFKRSTSESTLNQLSDLFGSFSIFPQRKESKVAGKMHRQSSGVDLQSIEAEGSCNPPKLRWNASASANMSTLASQSNPTNSAPPKRTTIWSFDEKLLIQTLYKVLGYVSKTYPIVLYMRDVDKMLNRSQRIYNLFQKMLKQISGPILVLGSRVLDSGDDYKEVDEKLTSLFPYNIEIRPPDDESQLVSWQTQFEEDMKMIKAQDNRNHIMEVLAANDLYCDDLDSICVADTMVLSSCIQEIVVSAISDHLMNGKDPEYRNGKLVISCNSLSHALDIFQEGKFIGRDTLKLEAQGKVTPEQREDGAVEKPEAKSENPAPAIKAEAGISTSEGNTQVPPDNEFEKRIRPEVIPANEIGVTFSDIGALDDTKQSLQELVMLPLRRPDLYAGGLLSPCRGILLFGPPGTGKTMPAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMPKIKNEFMSHWDGLMTNKGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSMENREKILRTLLEKDKVDEGLNFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQEILKDQKKRQSTVEITQGSMDTKEEFKLERVINLRPLNMQDFKEVKKQVAASYAAEGAGMSELKQWNQLYGEGGSRKQEQLSYFL* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0090 825 Pfam ATPase family associated with various cellular activities (AAA) 551 681 IPR003959 GO:0005524|GO:0016887
Lan6g0090 825 Gene3D - 510 792 IPR027417 -
Lan6g0090 825 Pfam AAA+ lid domain 705 742 IPR041569 -
Lan6g0090 825 ProSitePatterns AAA-protein family signature. 654 673 IPR003960 GO:0005524|GO:0016887
Lan6g0090 825 MobiDBLite consensus disorder prediction 447 496 - -
Lan6g0090 825 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 825 - -
Lan6g0090 825 SMART AAA_5 547 684 IPR003593 -
Lan6g0090 825 CDD AAA 549 682 - -
Lan6g0090 825 Gene3D - 683 787 - -
Lan6g0090 825 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 825 - -
Lan6g0090 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 511 758 IPR027417 -
Lan6g0090 825 MobiDBLite consensus disorder prediction 449 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0090 Lan-Chr6 604575 610346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0090 511 776 Calmodulin-binding Proteins AT3G56690 35.055 1.47e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0090 - - gmx:100808011 1261.13