Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0085 ATGGAGCATTTCCGGCATATTGGAGAAGTTGTTGGAAGTCTGAAAGCTCTAATGGTGTTGCGCGATGAGATTCAAATTAACCCGCGTCAGTGTGGTTTGATCATTGACATCTTCAGTTTGGCATTTGAAACAATAGCAGATGACATAAGGCAGAACCTGAAGCTGGAAGAGAGGAACACAAAATGGAAAGCCCTTGAATTTCCATTGAGAGAACTATGCAGAGTTTTCAAAGAAGGGGAACTTTACATAAGGCATTGCTTGGATTCCAAGGATTGGTGGGGGAAAGCAATCACTTTCTCTCAGAACAATGATTGTGTTGAATTCCACATCCACAACTTGTTATGCTACTTCCCTGCAGTCATTGAGGCAATCGAAAACGCTGGCGAGATCTCAGGTCTTGATCAAGATGAGAAGGAGAAGAAAACGCTTATCTTAGCAAGGAAATATGACATGGAATGGAATGATCCTAAACTTTTTCAATGGAGATTTAGCAAGCAGTATTTGGTTTCGCGTGATATATGCAAGCAATTGGAGAATGCTTGGAGGGAAGATAGATGGAGACTTATTGAAGCACTTAAAGAGAAGAGAACTTCTAACAAAGACACATTGACAAAGAATGAGTTGCGCCTTGCGGATATGTTGCTCAAGAAACTGCTTCATGGATCAGATAAAATGAACATTCAACTATGTCCAATTTCAGTGCTGCTAGGGGCTAAGGATTACCAAGTGCGGCGAAGATTAGGCCGCGGTCGAGACTTTAAGGAAATCCAATGGCTTGGACAAAGCTTTGCATTGAGGCACTTTGTTGGGGAGATGCGAACATACCAGACCGAGATTTCAACCCTTCTTTCACTTTCTCATCCTAACATATTGCAATACCTGTGTGGTTTTTATGATGATGAGAAAAGAGAGATTTCTGTTGTGATGGAGTTGATGAACAAGGACTTATGGACCTACATGAAGGAGAATTGTGGTCCAAGGAGACAAATTTTGTTCTCTATACCCGTTGTTGTGGATCTCATGCTTCAAATGGGAAGAGGCATTGAGTACCTACACTCCAAAAAAATTTACCATGGTGACCTTAACCCTTATAATGTCCTGCTCAGACCTAGAAACTGCCAAGAAGGTTATTTTCAAGCAAAGGTTGCAGGGTTTGGCCTGACTTGTGTCAAAAATATTGAAACTAAAACTTCAAATAATGAGGAGTTTAACCCTTCTATCTGGTATGCCCCAGAAGTTCTAACTGAGTTAGAACAAAAAGGAAATACTTCTACATCTTCCAAGTACTCTGAGAAAGCTGATGCATATAGCTTTGGAATGATATGTTTTGAACTTTTAACAGGTAAAGTGCCTTTTGAAGATAACCATCTTCAAGGTGACAAAACAAACCAAAAAATCAAAGGAGGGGAAAGGCCTTTGTTCCCACACCGTTCACCGAAATACCTTGTGAGTTTGATCAAAAAATGTTGGCAAAGTGACCCTTCTCAACGTCCAACTTTCTCATCTATATGTCGAATTTTGCGCTACATCAAAAAGTTACTTTCAATGAACACAGAATTCCATGTTATCAATCCTGAACTCAATCAACTTGAGTTGTTATCCCCACCTGTAGATTGTTGTGACATAGAAGCAATGTTCCTTAAGAACTTCCCAATGGATAGGCCTTCTATTTTGTCCTCAATATCACAAATACCATATGAAATGTTTGCTTATAAAGTTGTGGAGAAAGGAAAGATTATAAGTAATAATAGCAATGCTAAAGATAACAAGTACATTGAGACAGAAATGGATGAGGCTACAATGTCTAGTGAAGAAAATGAAGAACAGAATAAAGTTTGTGGAGATGATAATGCATCCATAGCAGAAGAAATGCTCCAAGACCCGCTCCTACTAATAACCATACCGAAGTCAAATTGTGAAGATAGAAAGCTTGTTTGCTCTAACGTATCTTCCAAGAAAAGTGTCAAAGTAAAGAAACCAACACTGGACAAGGCCAAAAAAGACAAAGGAATACCAAAATTGCAAGCAACAAGACCATTACCACCGTCTTTACATGGTTGCGGTTTAGGGGTGAATAAGGCGAGTTCCTCATCGACATCCAAGCCTCTGAGCCCGCCGGCCAGAAGAATGGCTTCCGGTGTTTCAGAATCTTTCAAGATCAACAAACCATCACTGTCCACTCCTTCCAGCCCAGGTAGAAGAAAAACAACATATGAGGCCCAAGTTTTCGATTCAAAGTCCAGCTTAAAGTTGAAACAGAGTTTGTCACCATTGTCCAAATATGGCAACATCACAGACTCTAATAGTTTAAAGATGAAAAGGTCACAACAAACATTGAACCCTTCTTTGAGCCCAGCAAGAGTTAGAAGTACAAGTACAAGTACAAGTATTGTCCCTAGTTCGAAGATTCAAAAGGGAATCATGTTGGGCACATTCACAAGCAGAAAAAATAGTAATGTCTCTGATTTGGATAAGACAACAAGAGGTAGATTATCACCATTGGCATTGAGTCCTTTAAGCCCATATGTGACAAAAGGAAGAAAATATGATCACTTTTCTGACTATGAAAACATGTATAAGACCAATAGACAAAACTTGTCCACATTAGTATTGAGACCTTTAAATGGTCATGTCTCGGATTAA 2643 0.3946 MEHFRHIGEVVGSLKALMVLRDEIQINPRQCGLIIDIFSLAFETIADDIRQNLKLEERNTKWKALEFPLRELCRVFKEGELYIRHCLDSKDWWGKAITFSQNNDCVEFHIHNLLCYFPAVIEAIENAGEISGLDQDEKEKKTLILARKYDMEWNDPKLFQWRFSKQYLVSRDICKQLENAWREDRWRLIEALKEKRTSNKDTLTKNELRLADMLLKKLLHGSDKMNIQLCPISVLLGAKDYQVRRRLGRGRDFKEIQWLGQSFALRHFVGEMRTYQTEISTLLSLSHPNILQYLCGFYDDEKREISVVMELMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMGRGIEYLHSKKIYHGDLNPYNVLLRPRNCQEGYFQAKVAGFGLTCVKNIETKTSNNEEFNPSIWYAPEVLTELEQKGNTSTSSKYSEKADAYSFGMICFELLTGKVPFEDNHLQGDKTNQKIKGGERPLFPHRSPKYLVSLIKKCWQSDPSQRPTFSSICRILRYIKKLLSMNTEFHVINPELNQLELLSPPVDCCDIEAMFLKNFPMDRPSILSSISQIPYEMFAYKVVEKGKIISNNSNAKDNKYIETEMDEATMSSEENEEQNKVCGDDNASIAEEMLQDPLLLITIPKSNCEDRKLVCSNVSSKKSVKVKKPTLDKAKKDKGIPKLQATRPLPPSLHGCGLGVNKASSSSTSKPLSPPARRMASGVSESFKINKPSLSTPSSPGRRKTTYEAQVFDSKSSLKLKQSLSPLSKYGNITDSNSLKMKRSQQTLNPSLSPARVRSTSTSTSIVPSSKIQKGIMLGTFTSRKNSNVSDLDKTTRGRLSPLALSPLSPYVTKGRKYDHFSDYENMYKTNRQNLSTLVLRPLNGHVSD* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0085 880 Pfam Protein tyrosine and serine/threonine kinase 273 506 IPR001245 GO:0004672|GO:0006468
Lan6g0085 880 SUPERFAMILY Protein kinase-like (PK-like) 239 518 IPR011009 -
Lan6g0085 880 Pfam Protein of unknown function (DUF1221) 21 237 IPR010632 -
Lan6g0085 880 PANTHER SERINE-THREONINE PROTEIN KINASE 1 725 - -
Lan6g0085 880 MobiDBLite consensus disorder prediction 717 737 - -
Lan6g0085 880 Gene3D Transferase(Phosphotransferase) domain 1 239 531 - -
Lan6g0085 880 ProSiteProfiles Protein kinase domain profile. 241 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0085 880 MobiDBLite consensus disorder prediction 690 705 - -
Lan6g0085 880 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 725 - -
Lan6g0085 880 MobiDBLite consensus disorder prediction 662 737 - -
Lan6g0085 880 MobiDBLite consensus disorder prediction 758 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0085 Lan-Chr6 573048 576454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0085 275 507 MAP Kinase Kinase Kinase AT1G62400 31.513 8.05e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Lan6g0085 PK_Tyr_Ser-Thr 9.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0085 - - cam:101509043 1069.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0107 17 606968 610867 Lan6g0085 6 573048 576454 LSH