Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0082 ATGGACAAAAAGGGTTCCAAAAACAAGGGAAAAGTCTCTACAACAAGTACCACAAGCACAACCTCTGAAGAAGTGAGCAGTAATGAATGGAAATTCATAGATATGAACAAGCAAGAGGAGGATCTCATTCACAGAATGTATGCTCTAGTTGGAGATAGATGGGATTTGATAGCGGGTCGCATTCCAGGTCGAAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAAACATGGAGATGCTTTTTCTGTTGGAAGAAATAAAGATAATAAACCATCAAACTCGTGA 285 0.386 MDKKGSKNKGKVSTTSTTSTTSEEVSSNEWKFIDMNKQEEDLIHRMYALVGDRWDLIAGRIPGRKAEEIERFWIMKHGDAFSVGRNKDNKPSNS* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0082 94 Gene3D - 36 76 - -
Lan6g0082 94 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 6 86 - -
Lan6g0082 94 MobiDBLite consensus disorder prediction 10 28 - -
Lan6g0082 94 SUPERFAMILY Homeodomain-like 37 79 IPR009057 -
Lan6g0082 94 CDD SANT 35 73 IPR001005 -
Lan6g0082 94 MobiDBLite consensus disorder prediction 1 28 - -
Lan6g0082 94 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 6 86 - -
Lan6g0082 94 SMART sant 31 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0082 Lan-Chr6 552135 553762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0082 35 73 MYB Transcription Factor Family AT5G52600 56.410 1.65e-11 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan6g0082 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0082 K09422 - gmx:100814431 121.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0104 17 594974 596652 Lan6g0082 6 552135 553762 LSH