Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0081 ATGCAAGAAGAAAAAACACAGTTTGATCTCCAAGATGGAGCTGATATTGGTTCCTCTTTATCAAAGCTCATCTTATCAAGTGGAACAAATACTCTTGACTCAATTTTCTCTCATTGCCCACCAACATATTCAATTTCCACTACTACTTCCAGCACTAGCACAAGTCCTAGTACCAATTCTTTGTTAGAGTGCTTTGAACCTTTAGGCACTTCTACCTTCGAGTCTCTGGGTTCTTCCGTCTATCTTCGCCAAAGAGATATCTTGCAAAAGTTATACCAAGAAAGCAGGGTAAATGGATCTTTTGTCCCAACTTTTCCAATGGCAAATCCATCTATAAATTCTGTCTCATACACAAATTCTTTGACTTATTTGGTGAACGGCCCTTACAAGAAGAAGCAATACAGAGGAGTGAGGCAGAGGCACTGGGGAAAATGGGTTGCAGAGATTAGACTCCCTCAGAACAGGATGAGAGTGTGGCTTGGAACTTATGAAACTGCTGAAGCTGCTGCTTATGCTTATGATCGCGCCGCTTATAAGCTCCGTGGAGAATATGCACGATTGAATTTCCCAAATCTTAAGGATCCAACTAAGTTAGGATTTGGAGATTCAACCAGATTGAATGCTTTGAAGAGCTCTGTGGATGCTAAAATTCAAGATATTTGTCAAAAGGTGAAAAGGGAGAAAGCTAAAAAGAGTGCAGCAAAGAAGCTTAAATCAGCTAATGGCTCAAACCGTGAGAAATCCTCTGACATGAATGCCAACTCATGTTCTAGTTCTTCATCCTTGTCACAGACCAATTTTTGTGATAATTGGGCAAATGAGTTGTTATTGCCTAGAGAATTTCCGATGATGGTAACAGAGGAACCAGAATTTGAAGGATGTTCACTGGCAAGGATGCCATCCTTTGATCCTGAGTTAATTTGGGAACTTTTGGCAAATTAG 942 0.4034 MQEEKTQFDLQDGADIGSSLSKLILSSGTNTLDSIFSHCPPTYSISTTTSSTSTSPSTNSLLECFEPLGTSTFESLGSSVYLRQRDILQKLYQESRVNGSFVPTFPMANPSINSVSYTNSLTYLVNGPYKKKQYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDSTRLNALKSSVDAKIQDICQKVKREKAKKSAAKKLKSANGSNREKSSDMNANSCSSSSSLSQTNFCDNWANELLLPREFPMMVTEEPEFEGCSLARMPSFDPELIWELLAN* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0081 313 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
Lan6g0081 313 Gene3D AP2/ERF domain 132 191 IPR036955 GO:0003700|GO:0006355
Lan6g0081 313 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 276 313 - -
Lan6g0081 313 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 6 264 - -
Lan6g0081 313 MobiDBLite consensus disorder prediction 244 264 - -
Lan6g0081 313 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Lan6g0081 313 MobiDBLite consensus disorder prediction 232 264 - -
Lan6g0081 313 SUPERFAMILY DNA-binding domain 133 190 IPR016177 GO:0003677
Lan6g0081 313 Pfam AP2 domain 133 183 IPR001471 GO:0003700|GO:0006355
Lan6g0081 313 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Lan6g0081 313 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
Lan6g0081 313 CDD AP2 132 192 IPR001471 GO:0003700|GO:0006355
Lan6g0081 313 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 276 313 - -
Lan6g0081 313 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0081 Lan-Chr6 545130 546439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0081 14 313 AP2-EREBP Transcription Factor Family AT1G64380 45.481 1.77e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan6g0081 AP2 4.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0081 - - lang:109331119 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0103 17 587551 589120 Lan6g0081 6 545130 546439 LSH