Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0052 ATGATCTCAATTGAGACTCAAAACACACCTGAATTGTCTTCCTCTAAAAATGATCAAAATCAACCTTCTCCTATAACTAATACCCATGTCTTCAAATCTAAATTACCAGATATACCCCTCTCTAACCACCTCCCTCTTCATACCTATTGCTTTCAAAACCTCTCTCAATTCTCCAATCGCCCATGCCTAATTGTTGGTTCCGCTTCTAAGACATACACCTACGCCGAAACTTACCTCCTATGCCGGAAAGTCGCCGCCGGTTTTTCCAAACTTGGTATCGGAAAAGGTGATGTCATCATGATCTTGCTTCAGAACTCGGCTGAGTTTGTGTTTTCCTTCATTGCTGCTTCCATGATAGGCGCCGTCGCCACCACCGCGAATCCGTTTTATACCTCCGCGGAGATTTTCAAGCAATTGAGTGTGTCCAAGGCCAAACTCATCGTCACGCAGTCTATTTACGTGGAGAAGCTTCGCGAGCACGCTAAGATTGGGGAGGATTTTGTGGTGATTACGGTGGATGATGCGCCGGAGGATTGCTTGCATTTCTCAGTGGTGTCGGAAGGGGATGAGAATGAAGTGCCGGAGGTGGAGATCCAACCGGATGACACGGTGGCACTGCCTTTCTCTTCTGGCACCACGGGGTTGCCGAAGGGAGTCATTCTTACTCACAAGAGCCTAACCACGAGTGTGGCTCAACAGGTGGACGGAGAGAACCCGAATCTGTATCTGACTCCAGAAGACGTTCTACTATGTGTTCTTCCACTGTTTCACATATTCTCTTTAAACAGTGTTCTCCTATGCGCTCTAAGAGCTGGAAGTGCTGTTTTACTAATGCACAAATTTGAGATTGGTTCTTTGCTTCAATTTATACAACGTTACAGAGTATCTGTGGCCATGGTGGTGCCGCCGCTGGTGTTAGCATTAGCTAAAAACCCAACGGTGGCAGAGTTTGACTTGAGCTCCATCAGGTTGGTGTTGTCAGGGGCTGCGCCACTAGGGAAGGAGCTGGAGGAGGCTCTACATAGCAGGGTACCCCAAGCTGTTTTAGGACAGGGGTATGGAATGACAGAAGCAGGGCCTGTGTTATCCATGTGCTTAGGATTTGCAAAGCAAGCATTCCCAATAAAGTCAGGATCATGTGGCACTGTTGTTAGAAATGCAGAACTCAAAATTATTGACCCTCAATCTCGCATTTCTCTTGGTTATAATCAACCTGGTGAAATTTGCATCCGAGGTCAACAAATCATGAAAGGATATTTGAATGATGAGAAGGCCACAGCAGAAACTATCGATGCAGAGGGTTGGCTTCACACAGGGGATGTTGGCTATATAGATGATGACGATGAAATTTTCATAGTCGATAGAGTGAAAGAACTCATCAAATTTAAAGGCTTCCAGGTGCCACCAGCAGAACTTGAAGACCTTCTTGTAAGCCATCCCTCCATTATAGATGCAGCTGTTGTCCCGAAAAAGGATGTAGCTGCTGGTGAACTTCCTGTTGCTTTCGTGGTGAAGTCAAACGGCTTTGATTTAACTGAAGAGGCTATCAAGGAGTTTATAGCAAAAGAGGTGGTGTTTTATAAAAGACTACATAAAGTGTACTTTGTGGATGCAATTCCAAGGTCTTCAGCAGGGAAGATATTAAGGAAAGACCTGAGAGCAAAGTTAGAAAGCAGCGACCAAACGTCTTAG 1692 0.4551 MISIETQNTPELSSSKNDQNQPSPITNTHVFKSKLPDIPLSNHLPLHTYCFQNLSQFSNRPCLIVGSASKTYTYAETYLLCRKVAAGFSKLGIGKGDVIMILLQNSAEFVFSFIAASMIGAVATTANPFYTSAEIFKQLSVSKAKLIVTQSIYVEKLREHAKIGEDFVVITVDDAPEDCLHFSVVSEGDENEVPEVEIQPDDTVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTPEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGSLLQFIQRYRVSVAMVVPPLVLALAKNPTVAEFDLSSIRLVLSGAAPLGKELEEALHSRVPQAVLGQGYGMTEAGPVLSMCLGFAKQAFPIKSGSCGTVVRNAELKIIDPQSRISLGYNQPGEICIRGQQIMKGYLNDEKATAETIDAEGWLHTGDVGYIDDDDEIFIVDRVKELIKFKGFQVPPAELEDLLVSHPSIIDAAVVPKKDVAAGELPVAFVVKSNGFDLTEEAIKEFIAKEVVFYKRLHKVYFVDAIPRSSAGKILRKDLRAKLESSDQTS* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0052 563 Pfam AMP-binding enzyme 53 462 IPR000873 -
Lan6g0052 563 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 29 555 - -
Lan6g0052 563 PANTHER 4-COUMARATE--COA LIGASE 3 29 555 - -
Lan6g0052 563 CDD 4CL 40 552 - -
Lan6g0052 563 SUPERFAMILY Acetyl-CoA synthetase-like 38 558 - -
Lan6g0052 563 MobiDBLite consensus disorder prediction 1 26 - -
Lan6g0052 563 ProSitePatterns Putative AMP-binding domain signature. 206 217 IPR020845 -
Lan6g0052 563 Pfam AMP-binding enzyme C-terminal domain 471 546 IPR025110 -
Lan6g0052 563 Gene3D - 23 456 IPR042099 -
Lan6g0052 563 Gene3D - 457 560 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0052 Lan-Chr6 340192 344779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0052 8 469 Monolignol Biosynthesis Gene Families AT1G65060 69.247 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0052 K01904 - gmx:547930 904.82