Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0033 ATGAACACTCCTCACAGGAATCAGATCAACTCTCCTCTTCATCCCAACTTTTCTCCATTTCAGGATTCACCTGTTTTCAACTTTATCAATAGTTTATCTCCTATACAACCTGTTAAGACTGTTCCGATTACTCAGACTTTCAACTCACTTGCCTGTTCATCACCTCCGTCCATTTTCACATCACCACATGTCACCACTCTCAAGGAATCCAGATTCTTAAGGAGACATATCCCTTTGGACACATCAAAGCATACAGATTCATCTGAAGATGTAGATAAAATTTATTCAAATGAAGAGGCCCTTGCAGATTCAACTCATGTACATCATAACTTGAGCAGATTACAGGATCAAGAGATTTCCATAGGAGATGCTGCAACCGAGCTGCCACAATCCTTGAAGTATAATTGTGGTAGTCCTGGATATGATGCAACACTTTGCATCGATGAGGAGAACATCCTTCTGGAGTTGCCTAGTGAGGCAGCATCAGATGTTCCCTTTGTTAAAAAAGAACACCGTAAAAAAAACTCAGTTGAGAGCGAAGTTCTTTGTCAGGGAACATGTCAAATTGAGCCAAAGAGTGAACTCCAAGAGTGTGTTTGGGATGGTTTAACTCCTGATCCCGCTGATCTGTTTATTTTTAATTCACCAAATGAAGCAAGAGCTTTTAATGGTCTATTTCAAAAACCCTTGGACTCTTCTGTTGATTTTATGTCCCTGTTGCCACAATCTACCATCAATAATGGTCAGAATGTGCAAATTGTTCATTCTATTGCTTCTGGTTTTGAACATGAAATTGAAGATCATCGTTCTGAGCCAGTAGCAGCCACAGAAACAGACCATGCAGTGGACAATGTTGCCATGAGTAGCAATCCAAATGGGAAAACAGATGATGAGCTTGTTTCTGTGATGCACCGTGGTCTGCGGAGGCGCTGTCTAGACTTTGAGATGGCCAGTGTAAGGCGGAAGAACTCAGATGATTATTCAAAGACAGATTCCAATACTTTACAATCTGGTGGAAGGAATGTTGCTAATGAAAAGCAACCGATTCCTACAGAGCAGAACAGTGTTTCACGAAATTGCATTTTGCCGGGAATCGGTTTACACTTGAATGCACTTGCAACCTTAAAAGATCACAACATCATAAAAAAGGAAAAGTTTCCCTCTGGAAGACAACACACTCTGCTATGCTCCACTTCTTCGTTGCAAATCTCTACAAGCCAAGAACATCATCTATCCTTGGGTGCTGTATCATCTGAAAGAGAATTTGATTCGTCAAACAATGATGTTCAGCCTGGTGAAGATTGTTCCCAGGCGTCAGCTTACACGGCTCGTGAAAATCACATTTCGATTAGCCCCAAAAAGAAAAGACATAAGTCAGACCCAGCTGGAGAAACCGAGGGCTGCAAGCATTGTAATTGCAAGAAATCGAAGTGTTTGAAGCTTTATTGTGAGTGTTTTGCTGCTGGTGTCTACTGCATTGAACCTTGCTCCTGTCAGGACTGCTTCAACCAAGCTATTCACGAAGATACTGTTCTTCAAACTCGCAAGCAGATCGTGTCTCGTAACCCTCTGGCATTTGCTCCTAAAGTCATCAGAAGCTCCGAGTCTGTGCCTGACTTTGGGGGTGATCCAAATAAAACTCCAGCTTCAGCACGACATAAAAGAGGATGCAACTGCAAGAAATCAAGTTGCCTAAAGAGATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAAAATGCTTTTGGTAGAAAGGATAGTTCTGCTCTTGTAGATGCTTGGCCAGAAGAAGAATCCGGAGCACGCGAAAAGAATGTGGCAAAAAAAGCTTTACAGAAAACTGAAATTCAGAATATTGAAGATCATTCAGACTCTGCTCTTGTCGCAACACCATCACGGCTTTCCAGGACATTGCTTCCATTGCCCTCTTCATCCAAAGGAAAGCCACCAAGATCTTTTGTCACAACCATCTCCGGTTCTGCATTGCCTGCCAGCAGCCAAAAGCTTGGGAAACCAAATTCTCTTTGGTCTCAATCTAAGCATGTTCAAACTGTTCCGGATGATGAAATCCCGGATGCTCTCTGCAATGATAACTCTCCTGTCACTTGCATCAAAACTTCTTCTCCGAATGGCAAGAGGATATCTTCTCCCAAGTGTGACTTGGGGTCCTCTCCGAGTCGCAAAGGTGGCAAGAAATTGATATTAAAATCCATCACTTTATTTCCTTCCCTCGCCAATCAGCAGTAG 2274 0.4252 MNTPHRNQINSPLHPNFSPFQDSPVFNFINSLSPIQPVKTVPITQTFNSLACSSPPSIFTSPHVTTLKESRFLRRHIPLDTSKHTDSSEDVDKIYSNEEALADSTHVHHNLSRLQDQEISIGDAATELPQSLKYNCGSPGYDATLCIDEENILLELPSEAASDVPFVKKEHRKKNSVESEVLCQGTCQIEPKSELQECVWDGLTPDPADLFIFNSPNEARAFNGLFQKPLDSSVDFMSLLPQSTINNGQNVQIVHSIASGFEHEIEDHRSEPVAATETDHAVDNVAMSSNPNGKTDDELVSVMHRGLRRRCLDFEMASVRRKNSDDYSKTDSNTLQSGGRNVANEKQPIPTEQNSVSRNCILPGIGLHLNALATLKDHNIIKKEKFPSGRQHTLLCSTSSLQISTSQEHHLSLGAVSSEREFDSSNNDVQPGEDCSQASAYTARENHISISPKKKRHKSDPAGETEGCKHCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNQAIHEDTVLQTRKQIVSRNPLAFAPKVIRSSESVPDFGGDPNKTPASARHKRGCNCKKSSCLKRYCECYQGGVGCSISCRCEGCKNAFGRKDSSALVDAWPEEESGAREKNVAKKALQKTEIQNIEDHSDSALVATPSRLSRTLLPLPSSSKGKPPRSFVTTISGSALPASSQKLGKPNSLWSQSKHVQTVPDDEIPDALCNDNSPVTCIKTSSPNGKRISSPKCDLGSSPSRKGGKKLILKSITLFPSLANQQ* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0033 757 SMART CXC_2 466 507 IPR033467 -
Lan6g0033 757 SMART CXC_2 552 593 IPR033467 -
Lan6g0033 757 MobiDBLite consensus disorder prediction 711 738 - -
Lan6g0033 757 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 755 IPR044522 GO:0003700
Lan6g0033 757 MobiDBLite consensus disorder prediction 329 355 - -
Lan6g0033 757 MobiDBLite consensus disorder prediction 711 731 - -
Lan6g0033 757 MobiDBLite consensus disorder prediction 322 355 - -
Lan6g0033 757 MobiDBLite consensus disorder prediction 646 690 - -
Lan6g0033 757 ProSiteProfiles CRC domain profile. 467 592 IPR005172 -
Lan6g0033 757 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 755 - -
Lan6g0033 757 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 555 590 IPR005172 -
Lan6g0033 757 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 469 504 IPR005172 -
Lan6g0033 757 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0033 Lan-Chr6 237810 243115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0033 18 757 CPP Transcription Factor Family AT3G22780 41.207 8.70e-144 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lan6g0033 TCR 2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0033 - - gmx:100804447 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0037 17 190330 194472 Lan6g0033 6 237810 243115 LSH
Lan18g1167 18 16436237 16440835 Lan6g0033 6 237810 243115 LSH