Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0011 ATGAAAACTTATCATACAAACCATGTAGTAGTAACAATGTTTGTCTCCCACTATTGCAGACCTTTGGTTTTTATTTTAATTTTAATCTCTTTTTTTTTGCTCATCAACCTCAATGATTCCTTGCCATCCTACAACTACTTCCATATATGTGAAGATCCATTAGATAATGCAACTGATCCTAATTTCCAATCCAATCTCTCTCCCCTCTTGGATTTTATATCTTCAAAAGCTTCCCTCCACAGCTTCTACAATGCTAGTATTATTATTAGTAGCAATAACAATAGTAGGAGTAGTAGAATCTATGGCCTTTTTCTATGCAGGGGTGATGTTTCAAATGACACATGCCAAAACTGTACCATAACTGCAAATCAAGAAATCAGAATCCAATGTGCATCTAACACAAGTGCAATCATCTGGTATGACACATGCATGCTTCGCTACTCCAACAAAAACTTCTTTGGAGAGGAACAAACTTCACCACTAGCATTCGTGGGGAACATCACAAATACAACAACTCCTTCAGCCATTCAAGGTTATAGGGATGAACAAACACTGATGTATCAACTAATAAAAGAAGCCTCAAGTACGGATATGCTGTTCAAAACAGGGAAATCTGTGGGGGGAAATGAGTCTGAAAATGGATATGGGTTGGTTCAGTGCACAAGAGATATAAATAGCAGTTCATGTAACTCTTGTTTGCATCAGTTGATGAAGGAGGCTGACAAGTGTTGCCAACACAAGGTTGGGTGGAGCTTAATGGGTCCGAGTTGCAATATAAGGTATGAGAGGTATAACTTCTACAACCAAACTTGTGCACCACCAGAGTCTCTTCCACCACTGCCATATTCTCAAGGGAAGAGAAGGTACTTAAAGGCAAAATTTCTAGCAATTCATGTCATACCAATTGCAGTTGTGGCTGCTCTTACGGTGTTAATGTGGTTTTCGTGTCTGCACTGGAAGAAAAGAAAAAGAGGAAGAACAGATGATGAAATTCTAGTCAAGAGTTTGAAAAGCTCAAGTAGACACTTGAAGGAACAGGGACATGGGGACAACAGTGGAGACATGCATTACTTTAGTTTGAGCACCATCAAGATTGCTACCAACTATTTCTCTGACGACGCTAAGCTTGGGGAAGGTGGATTTGGTCCTGTCTTCAAGGGGAAGTTGAGCAATGGCAGAGAAATAGCAGTTAAAAGGCTTTCATTCAAATCAACACAAGGCCTTGAAGAATTCAAGAATGAAGTGATGCTAATAGCTAAACTTCAACACAGAAATCTTGTAAAGCTCCTGGGATGTTGCGTTGGTGAAAATGAAAAGCTTCTTGTCTATGAGTACATGGCCAATACTAGTCTTGATGCCTTCCTGTTTGATCCAATCAAACGTATAGAGCTGGATTGGCCTAAACGGGCAAGGATTATTAATGGAATTGCAAAAGGCCTTGTGTATTTACATGAGGACTCACGCCTCAAAATTATTCATAGGGATCTAAAAGCTAGCAATGTGTTGCTGGATGAAGAGATGAACCCAAAGATTTCAGACTTCGGGACTGCTAGGATGTTTGGTGGCAATCAAAATGAAGCAAGCACTGATAAAGTCGTTGGCACATATGGTTATATGGCACCAGAATACGCATTGGAAGGATTATTTTCCATTAAGTCTGATGTTTACAGCTTTGGAGTTTTGATGCTAGAAATTATGAATGGAAGAAAGAACAGTGGCTTCTACCAACAGGAGCGTGGTTGTGGTGAAAGCCTTCTATCCTATGCATGGCGACTATGGAGTGTAGGCAAGGGAGTGGAATTTATGGACCCAATCTTGGTGAAGTCTTGCCCCAAGAATCAGGCACTAAGATGGATACATATTGGTTTGTTGTGTGTTCAAGAAAGACCAAAGGATAGACCAATCATGTCATCAGTTATTGTAATGCTTGGGAGTGCTATCAATCTTCCTTCACCATCTGCACCTCCCTTTTCTGTAGGCAGATATTTTGCATCTGACCAATCTTCAACATCTGCTAAAGATATTGAATTCATGCCATCACCTTCCAATAGTGTTTCTGCTAAGGAAGAACTTTCATTAGCCCCAATAGCCCTGCTACTTTTGTAA 2106 0.4008 MKTYHTNHVVVTMFVSHYCRPLVFILILISFFLLINLNDSLPSYNYFHICEDPLDNATDPNFQSNLSPLLDFISSKASLHSFYNASIIISSNNNSRSSRIYGLFLCRGDVSNDTCQNCTITANQEIRIQCASNTSAIIWYDTCMLRYSNKNFFGEEQTSPLAFVGNITNTTTPSAIQGYRDEQTLMYQLIKEASSTDMLFKTGKSVGGNESENGYGLVQCTRDINSSSCNSCLHQLMKEADKCCQHKVGWSLMGPSCNIRYERYNFYNQTCAPPESLPPLPYSQGKRRYLKAKFLAIHVIPIAVVAALTVLMWFSCLHWKKRKRGRTDDEILVKSLKSSSRHLKEQGHGDNSGDMHYFSLSTIKIATNYFSDDAKLGEGGFGPVFKGKLSNGREIAVKRLSFKSTQGLEEFKNEVMLIAKLQHRNLVKLLGCCVGENEKLLVYEYMANTSLDAFLFDPIKRIELDWPKRARIINGIAKGLVYLHEDSRLKIIHRDLKASNVLLDEEMNPKISDFGTARMFGGNQNEASTDKVVGTYGYMAPEYALEGLFSIKSDVYSFGVLMLEIMNGRKNSGFYQQERGCGESLLSYAWRLWSVGKGVEFMDPILVKSCPKNQALRWIHIGLLCVQERPKDRPIMSSVIVMLGSAINLPSPSAPPFSVGRYFASDQSSTSAKDIEFMPSPSNSVSAKEELSLAPIALLLL* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0011 701 CDD STKc_IRAK 376 643 - -
Lan6g0011 701 SUPERFAMILY Protein kinase-like (PK-like) 352 668 IPR011009 -
Lan6g0011 701 Gene3D - 162 266 IPR038408 -
Lan6g0011 701 Gene3D - 46 152 IPR038408 -
Lan6g0011 701 ProSiteProfiles Gnk2-homologous domain profile. 158 266 IPR002902 -
Lan6g0011 701 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 40 670 - -
Lan6g0011 701 Pfam Salt stress response/antifungal 57 149 IPR002902 -
Lan6g0011 701 Pfam Salt stress response/antifungal 184 264 IPR002902 -
Lan6g0011 701 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 40 670 - -
Lan6g0011 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Lan6g0011 701 Gene3D Phosphorylase Kinase; domain 1 342 445 - -
Lan6g0011 701 Gene3D Transferase(Phosphotransferase) domain 1 446 650 - -
Lan6g0011 701 ProSiteProfiles Gnk2-homologous domain profile. 44 152 IPR002902 -
Lan6g0011 701 SMART serkin_6 370 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0011 701 ProSiteProfiles Protein kinase domain profile. 370 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0011 701 Pfam Protein tyrosine and serine/threonine kinase 374 641 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0011 Lan-Chr6 110643 114133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0011 26 671 Receptor kinase-like Gene Family AT4G05200 42.262 7.25e-171 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan6g0011 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0011 - - lang:109348525 1381.31