Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1268 ATGAATAGTGAAGAAAGACACAGAGGTATCAAAAGAAAGCCCCCAGATTTTGATCCAGGCCATCAACACGGTTCTAACAATCTCAATTCTAGACCTTATGATAGGGACATGCTTCCTCCTGGGTGGTTAGACTGCCCACCACATGGTCAAGAACTAGGATGCATAATCCCTTCAAAGGTTCCACTTGGTAAATCTTTCAATGATTACATTCCAGGTCAAAAATATACTCCCCAGCAAGCAATTCTTCAACAACGAGTTTTGGGTAGAGAACTTGGTTTAGTGATTGATTTAACAAATACTAATCGTTACTATCCAGTGTCAGACTGGACAAGAGAAGGTGTTCGCCATGTCAAGATAAGATGCAAAGGAAGAGATTCTGTACCTGATGATGAATCTGTAAAAATGTTTTGTGATGAGGTTCTTGATTTTCGCTCCCGAAGAACTGACACGGAGAAATATATACTTGTACATTGCACACATGGGCACAATCGCACAGGTTATATGATTGTTCATTTTCTTGTGCGTACAGAATCAATTTCTGTCACCGAGGCAATAAATAAATTTGCTAGGGCACGCCACCCAGGAATTTACAAGCAGGACTACATTGACAACCTATACATGTTTTATCATGAAAAGAAGCCTGAAGATCTTGTATGTCCTCAAACTCCAGAATGGAAGAGACTTTCTGACCCTGATTTTCATGGTGTGGCTGTCCCTTATGTTGACAATAATGGAGATATTCCTCAGCAGGAGAATATCTCGAGGAATGAATTATTGACAAATGATGATGTTTTGGGAGATCCAATTCCTCCAAACCAGCTGTATAAAATGCAAGAACTTTGTTACCAACTGCTCAAGTTGGGCACAAAGGGGAGAGGACATCAAATGTTTCCTGGATCACACCCTGTTTCTCTGAACAGGGATAATCTGCAACTGTTAAGACAACGATATTACTATGCCACGTGGAAAGCTGATGGGACACGATATATGATGATGATTACTGGGGACGGATGTTATCTGATTGATAGAAAATTTCTTTTTAGAAGGATTGATATGCGTTTTCCTTGCAGATACTCAAATGGGGGTATACCTGAGAGGAATCATCACTACACATTACTTGATGGGGAGATGATTATTGACATGGATCCACAAACACGTAAGCAAGAGAGAAGATACCTCATTTATGATTTGATAGCAATAAATCAAGTCTCTTTGACAGAGCTGCCTTTCTATGAAAGGTGGAAATTGCTGGAGAAAGAAGTAATTGAACCTCGTAACATGGAACGTGAGACTCTCTCCAAGAGTATAAATCCTCATTACAGATATGACCTGGAACCATTTAGTGTGAGGAGGAAGGGTTTTTGGTTCCTATCTACTGTGTCAAAGCTCCTTGATAAATTCATTCCACAACTCTCACATTCAGCAGATGGTCTTGTATTCCAGGGTTGGGATGATCCATATGTCCCTCGAACACATGAAGGTCTTCTGAAGTGGAAATACCCTGAGATGAACTCTGTTGATTTCCTGTGTGAGGTTGGAGCTGGAAATCGTCCCCTGCTCTTTCTGTTTGAACGTGGGGTGAAGAAGTTAATGGAAGGGAGTAATGTTATTTTTCAAGGTGATGCTTCAGATATTCCTTCCTATTCAGGGAAAATCATTGAGTGCTCATGGGATCCTGTAGAGCATCATTGGATTTGTATGCGGGTCAGAATTGACAAAGCAACTCCAAATGATATCAATACCTACAGAAAGGTAATGCGAAGCATAAGGGATAATATTACACAAGATGTGCTGTTGAACGAGATCAATGAGATCATTCGCCTACCTTTGTATGCAGACAGAATACAAAGAGATATCAAGGCTCACCAGCATATGCTCTCTTCACGACGCAAGTGA 1896 0.4061 MNSEERHRGIKRKPPDFDPGHQHGSNNLNSRPYDRDMLPPGWLDCPPHGQELGCIIPSKVPLGKSFNDYIPGQKYTPQQAILQQRVLGRELGLVIDLTNTNRYYPVSDWTREGVRHVKIRCKGRDSVPDDESVKMFCDEVLDFRSRRTDTEKYILVHCTHGHNRTGYMIVHFLVRTESISVTEAINKFARARHPGIYKQDYIDNLYMFYHEKKPEDLVCPQTPEWKRLSDPDFHGVAVPYVDNNGDIPQQENISRNELLTNDDVLGDPIPPNQLYKMQELCYQLLKLGTKGRGHQMFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMMITGDGCYLIDRKFLFRRIDMRFPCRYSNGGIPERNHHYTLLDGEMIIDMDPQTRKQERRYLIYDLIAINQVSLTELPFYERWKLLEKEVIEPRNMERETLSKSINPHYRYDLEPFSVRRKGFWFLSTVSKLLDKFIPQLSHSADGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLCEVGAGNRPLLFLFERGVKKLMEGSNVIFQGDASDIPSYSGKIIECSWDPVEHHWICMRVRIDKATPNDINTYRKVMRSIRDNITQDVLLNEINEIIRLPLYADRIQRDIKAHQHMLSSRRK* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1268 631 CDD RNA_5'-triphosphatase 41 207 - -
Lan5g1268 631 Gene3D - 541 608 IPR012340 -
Lan5g1268 631 CDD Adenylation_mRNA_capping 272 500 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lan5g1268 631 PIRSF mRNA_capping_HCE 25 631 IPR017074 GO:0004484|GO:0006370|GO:0140818
Lan5g1268 631 ProSitePatterns Tyrosine specific protein phosphatases active site. 156 166 IPR016130 GO:0016311|GO:0016791
Lan5g1268 631 Gene3D Protein tyrosine phosphatase superfamily 17 232 IPR029021 -
Lan5g1268 631 Pfam mRNA capping enzyme, catalytic domain 301 499 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lan5g1268 631 MobiDBLite consensus disorder prediction 1 35 - -
Lan5g1268 631 Gene3D DNA ligase/mRNA capping enzyme 260 499 - -
Lan5g1268 631 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 134 203 IPR000387 GO:0016311|GO:0016791
Lan5g1268 631 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 38 226 IPR029021 -
Lan5g1268 631 Pfam mRNA capping enzyme, C-terminal domain 546 599 IPR013846 -
Lan5g1268 631 MobiDBLite consensus disorder prediction 1 19 - -
Lan5g1268 631 SUPERFAMILY Nucleic acid-binding proteins 502 616 IPR012340 -
Lan5g1268 631 PANTHER MRNA-CAPPING ENZYME-LIKE 3 631 - -
Lan5g1268 631 SMART dsp_5 71 211 IPR020422 GO:0006470|GO:0008138
Lan5g1268 631 PANTHER MRNA-CAPPING ENZYME 3 631 - -
Lan5g1268 631 Pfam Dual specificity phosphatase, catalytic domain 90 209 IPR000340 GO:0008138|GO:0016311
Lan5g1268 631 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 286 500 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1268 27 621 Protein tyrosine phosphatase (PTP) family AT3G09100 62.023 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1268 K13917 - gmx:100778292 1112.83