Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1256 ATGGAGGAGCTTCATGCTTCTTCTATAAACAACAAAACTTGTGCTTTAAGAAGTTGGATTATGATAGACCATCATGCCAATGAAACTATACTAGATGTTGACAAGTATACTATTATGCGCCTACTTCAAATCCATGCTAGAGATCTTAGAATTCTCGACCCTCTTCTTTCGTATCCATCTACCATTTTGGGCAGAGACAAAGCCATTATTCTCAATCTAGAGCATATTAAAGCTATTATCACCGCAAAAGAGGTATTCCTTAGAGACCCAAAGGATGATGATGTTGTGCCTATTGTTGAGGAACTTCGACGACGGTTACCAAAAGTAAATTGTTCTGGTCAAGGAGAAGAAGACAAGTCTACTCAAGAAGGCGAAGAGTTTCCATTCGAATTTCGGGCTTTAGAAGTTGCATTAGAAGCAATATGTAGTTTCCTTGATGCAAGGACAAGAGAGTTAGAGACGGCTTCTTATCCAGCTTTGGATGAACTCACCTCTAAGATTAGCAGCCGTAATTTGGATAGAGTTCGAAAATTGAAAAGTGCAATGACAAGGTTGACAAATCGAGTTCAAAAGATAAGAGATGAACTAGAAAACCTACTTGATGATGATGATGACATGGCTGAACTTTACTTATCAAGAAAGTTAGTAGTTTCATCTTCTCCCACCAGTAACTCTGATTCTCCAAACTGGCAATTTAACTCTCCAAATCTTGCTTCTAAGATACACACATCAAGTACTACAACAGTTCATATGGAGAATGATGTTGAGGAGTTAGAAATGTTACTTGAGGCCTATTTCATGCAAATTGATGGGACATTAAATAAACTGGCCACATTGAGAGAATATACTGATGACACAGAAGATTACATCAACATTCAGCTAGACAATCACAGAAATCAACTAATTCAGCTAGAGCTCTTCCTTTGTTCCGGAACTGTCTCTCTCTCCATATATTCATTGGTGGCAGCAATATTCGGTATGAACATTCCATATACATGGAAACAAGGTCACGAATATGTATTTAAATGGGTGGTGATCCTTACGGGAATGGTTTGTGCATCATTGTTTCTATCCATAGTATCTTATGCCCGACGCAAAGGCATTGTTGGGTCTTGA 1116 0.3835 MEELHASSINNKTCALRSWIMIDHHANETILDVDKYTIMRLLQIHARDLRILDPLLSYPSTILGRDKAIILNLEHIKAIITAKEVFLRDPKDDDVVPIVEELRRRLPKVNCSGQGEEDKSTQEGEEFPFEFRALEVALEAICSFLDARTRELETASYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKIRDELENLLDDDDDMAELYLSRKLVVSSSPTSNSDSPNWQFNSPNLASKIHTSSTTTVHMENDVEELEMLLEAYFMQIDGTLNKLATLREYTDDTEDYINIQLDNHRNQLIQLELFLCSGTVSLSIYSLVAAIFGMNIPYTWKQGHEYVFKWVVILTGMVCASLFLSIVSYARRKGIVGS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1256 371 Coils Coil 175 202 - -
Lan5g1256 371 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 371 IPR039204 -
Lan5g1256 371 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 5 371 - -
Lan5g1256 371 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 308 357 IPR045863 -
Lan5g1256 371 CDD Mrs2_Mfm1p-like 19 368 IPR039204 -
Lan5g1256 371 Gene3D Magnesium transport protein CorA, transmembrane region 96 301 - -
Lan5g1256 371 Gene3D - 2 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1256 Lan-Chr5 26277429 26280703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1256 12 344 MRS2 Gene Family AT5G64560 71.839 5.96e-155 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1256 K16075 - gmx:100799368 560.836