LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan5g1250	ATGACTTCTTCAAATGGAACTGGTTCTCCTTGTGGAGCATGCAAGTTTCTAAGAAGAAAATGTGCAGTTGATTGCATCTTTGCACCATATTTTTGCTCAGAACAAGGGCCTGCAAGATTTGCAGCCATACATAAAGTGTTTGGTGCAAGCAATGTTTCTAAATTGCTTTCACATATACCAGTTCATGATCGGTGTGAGGCTATTGTCACCATAGCTTATGAGGCTCAGGCTCGTGTCAGAGACCCCGTTTATGGCTGTGTTTCACACATTTTTGCCTTACAACAACAGGTGGGTTGGTTGCAAGCACAACTAATGCAAGTGAAATCTCAGCTGGCTCAAGACATGGTGGAATCCAGGAACATAGAGAATCATCAGTGGCCATCAGGGAATGTTAGTGGCCAACAAGGACAACCAATGAATCCATTTTGTCACATGAATCCCATATCTCCTCAAAGCTCACTTGAATCAATTGATCATAGCAACAATATCAATGATGGAATGGTCATGCAAGATATACAAAGAAGAGATGATTTTTCATTCCAAGCTTGTTCTAAGAAAAGATCACATAACAATGACTTGTGTGAGCTGCAAGAAATAGCACTCAGGATGATGAGGAACTAA	621	0.409	MTSSNGTGSPCGACKFLRRKCAVDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLSHIPVHDRCEAIVTIAYEAQARVRDPVYGCVSHIFALQQQVGWLQAQLMQVKSQLAQDMVESRNIENHQWPSGNVSGQQGQPMNPFCHMNPISPQSSLESIDHSNNINDGMVMQDIQRRDDFSFQACSKKRSHNNDLCELQEIALRMMRN*	207

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan5g1250	206	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 16	1	205	-	-
	Lan5g1250	206	ProSiteProfiles	LOB domain profile.	9	111	IPR004883	-
	Lan5g1250	206	Pfam	Lateral organ boundaries (LOB) domain	10	108	IPR004883	-
	Lan5g1250	206	PANTHER	LOB DOMAIN CONTAINING PROTEIN	1	205	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan5g1250	Lan-Chr5	26250831	26252137	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan5g1250	3	206	AS2 family	AT2G42430	53.138	1.51e-74	223

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Lan5g1250		LOB	6.9e-37	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan5g1250	K13944		-	gmx:100801508	326.25

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan9g0503	9	7834288	7836015	Lan5g1250	5	26250831	26252137	LSH