LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan5g1233	ATGGAATCTTTATCCAAATTTATACTCTTTTTCTTCACTTTATACACCCTTATTCTTACTACTATTACTACAACTATCCATGCACAATCTCTTCAAACTTACATAATTCAACTACACCCTCATGGCATAACTAGTTCTATGTTTACTTCTAAGCTCAATTGGCATCTTTCATTCATACAACAAACCATTTCATCTGATCATGAACCTTCTTCTCGCCTTCTATACTCTTATCGTACCGCGATGGATGGTTTTGCAGCTCAATTAACTGAGTCTGAGGTGGAGTACTTGAAAAAGTTGCCTGATGTTATCTCCATTAGGCCTGATAAGCAGGTTCAGATTCACACCACCTATTCTTACAAGTTCCTAGGACTCAACTCAGCAAGAGAAAATGGTTGGTATCAATCTGGATTCGGACGAGGAACTATAATTGGAGTGCTTGATACTGGAGTGTGGCCAGAGAGTCCTAGCTTCAATGATCATGGGATGCCTCCAATTCCAAGGAAATGGAAGGGTATATGCCAATCAGGACAGGCCTTTAACTCTTCCAATTGCAACCGAAAACTCATTGGTGCAAGGTACTTTACCAAAGGCCATCTTGCAGTATCACCTTCAAGAATTCCAGAGTATCTTTCTCCAAGAGACTCCTCAGGCCATGGCACACACACTTCATCAACTGCTGGTGGCGTTCCGGTGCCGATGGCTAGTGTGCTTGGTTATGCAGAAGGTGTTGCAAGAGGAATGGCTCCTGGTGCACACATTGCAGTGTACAAAGTGTGCTGGTTTAATGGCTGCTATAACTCGGACATCATGGCTGCAATGGATGTAGCAATAAGAGATGGTGTGGATATTCTATCTTTATCACTAGGTGGATTTCCAGTGCCTCTATTTGATGATAGCATTGCCATTGGAAGTTTTAGAGCAATGGAACATGGGATTTCAGTTATATGTGCTGCAGGGAACAATGGACCAACAGAAATGTCTGTTGCCAATGAAGCTCCTTGGATTAACACTGTTGGTGCAAGCACTATGGATAGGAACTTTCCAGCAATAGTTCACATGGGAAATGGACAAATTCTCTATGGAGAATCAATGTATCCAATGAGCAAGCTACTGAGCATTGGCAAGGAGCTTGAGCTTGTTTATCTGACAGACGCCGAAACCGAGAGCCAATTTTGCCTAAGAGGGTCTCTTCCAAGGGAGAAAGTTAAAGGCAAAATGGTGGTGTGTGATAGAGGTGTGAATGGAAGAGCAGAGAAGGGTCAAGTTGTGAAGGAAGCAGGTGGTGCTGCTATGATTTTAGCAAACACTGTGATAAACTTGGAAGAGGATTCAGTTGACGTTCATATATTGCCAGCAACTTTGGTAGGCTTTGATGAATCAGTCACATTAAAGGCTTACATAAACTCCACAATGAAGCCTCTTGCTAGAATTGAGTTTGGAGGAACTGTGATAGGAAAGTCTAGAGCTCCAGCAGTGGCAATATTTTCAGCTAGAGGACCAAGTTTTACAAATCCTTCAATCCTCAAACCAGATGTTATAGCACCAGGTGTGAACATCATTGCTGCATGGCCTCAAAACCTTGGTCCTACAGGCCTAGCAGAAGATACTAGAAGAGTGAACTTCTCAGTGATGTCTGGTACCTCAATGTCATGTCCTCATGTAAGTGGAATCTCTGCTCTCATTCATTCAGCTCATCCAAGATGGACACCAGCAGCTATCAAATCAGCAATCATGACAACAGCTGAGGTAACTGACCGCATCGGAAGACCGATACTCGACGAAGATAAACCAGCAGGACCTTTTGCCTTAGGAGCTGGACATGTGAATCCACAAAGAGCATTAAACCCAGGCCTGATCTATGACATTATGCCAAATGATTACATCAACCACCTTTGCAGCATTGGTTATACAAGGTCAGAGATATTCAGTATAACTCATAGAAATGTGAGTTGCAATGATATCATGAAGATTAATAGAGGCTTCAGCCTTAACTATCCATCAATATCAGTAATGTTCAAGCATGGAATGAGAACAAATGTGATCAGAAGGAGAGTAACAAATGTTGGAAGTGCTAACTCCATTTACTCAGTGGAAGTTGTGGCACCAGAAGGAGTAAAAGTGATAGTAAAACCAAAGAGGTTGGTTTTTAAGCAAATAAATCAAAGCTTGGGTTACAAGGTATGGTTTATATCAAGAAAAAGTGCTGATATAATGAACTATGCACAAGGGAGTTTGACATGGATACACACTCAAAATGGTTCTTACAGAGTTAGAAGCCCAATTGTAGTGACTTGGAAATCAAGATAA	2307	0.4166	MESLSKFILFFFTLYTLILTTITTTIHAQSLQTYIIQLHPHGITSSMFTSKLNWHLSFIQQTISSDHEPSSRLLYSYRTAMDGFAAQLTESEVEYLKKLPDVISIRPDKQVQIHTTYSYKFLGLNSARENGWYQSGFGRGTIIGVLDTGVWPESPSFNDHGMPPIPRKWKGICQSGQAFNSSNCNRKLIGARYFTKGHLAVSPSRIPEYLSPRDSSGHGTHTSSTAGGVPVPMASVLGYAEGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDILSLSLGGFPVPLFDDSIAIGSFRAMEHGISVICAAGNNGPTEMSVANEAPWINTVGASTMDRNFPAIVHMGNGQILYGESMYPMSKLLSIGKELELVYLTDAETESQFCLRGSLPREKVKGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTVINLEEDSVDVHILPATLVGFDESVTLKAYINSTMKPLARIEFGGTVIGKSRAPAVAIFSARGPSFTNPSILKPDVIAPGVNIIAAWPQNLGPTGLAEDTRRVNFSVMSGTSMSCPHVSGISALIHSAHPRWTPAAIKSAIMTTAEVTDRIGRPILDEDKPAGPFALGAGHVNPQRALNPGLIYDIMPNDYINHLCSIGYTRSEIFSITHRNVSCNDIMKINRGFSLNYPSISVMFKHGMRTNVIRRRVTNVGSANSIYSVEVVAPEGVKVIVKPKRLVFKQINQSLGYKVWFISRKSADIMNYAQGSLTWIHTQNGSYRVRSPIVVTWKSR*	769

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan5g1233	768	Pfam	Peptidase inhibitor I9	33	114	IPR010259	-
	Lan5g1233	768	PANTHER	SUBTILISIN-LIKE PROTEASE SBT1.2	28	764	-	-
	Lan5g1233	768	Gene3D	-	631	765	-	-
	Lan5g1233	768	ProSiteProfiles	Serine proteases, subtilase domain profile.	116	614	-	-
	Lan5g1233	768	SUPERFAMILY	Protease propeptides/inhibitors	53	113	-	-
	Lan5g1233	768	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	19	114	IPR037045	-
	Lan5g1233	768	SUPERFAMILY	Subtilisin-like	113	618	IPR036852	GO:0004252\|GO:0006508
	Lan5g1233	768	PRINTS	Subtilisin serine protease family (S8) signature	138	157	IPR015500	-
	Lan5g1233	768	PRINTS	Subtilisin serine protease family (S8) signature	214	227	IPR015500	-
	Lan5g1233	768	PRINTS	Subtilisin serine protease family (S8) signature	545	561	IPR015500	-
	Lan5g1233	768	Pfam	Fibronectin type-III domain	663	763	IPR041469	-
	Lan5g1233	768	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	28	764	IPR045051	-
	Lan5g1233	768	Gene3D	-	344	484	-	-
	Lan5g1233	768	ProSitePatterns	Serine proteases, subtilase family, serine active site.	546	556	IPR023828	-
	Lan5g1233	768	Pfam	PA domain	378	459	IPR003137	-
	Lan5g1233	768	CDD	Peptidases_S8_3	111	581	IPR034197	-
	Lan5g1233	768	Pfam	Subtilase family	138	584	IPR000209	GO:0006508\|GO:0008236
	Lan5g1233	768	CDD	PA_subtilisin_like	351	477	-	-
	Lan5g1233	768	Gene3D	Peptidase S8/S53 domain	140	627	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan5g1233	Lan-Chr5	26168160	26171397	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan5g1233	10	767	Subtilisin-like Serine Gene Family	AT1G04110	66.537	0.0	1083

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan5g1233	-		-	lang:109333602	1352.81

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan5g1233	5	26168160	26171397	Lan19g0496	19	7348790	7352022	LSH
	Lan5g1233	5	26168160	26171397	Lan11g1365	11	20846709	20849481	PCT
	Lan5g1233	5	26168160	26171397	Lan20g1013	20	10872271	10874762	PCT
	Lan11g1365	11	20846709	20849481	Lan5g1233	5	26168160	26171397	PCT
	Lan20g1013	20	10872271	10874762	Lan5g1233	5	26168160	26171397	PCT