Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1225 ATGGAGAACTTATTTCGCCTAGTTGATCATGAAGACTTCTTCTCAAAACGTTGCATTTGGGTGAATGGCCCTGTGATTGTAGGTGCAGGCCCTTCAGGCTTAGCCACAGCAGCATGCCTTAGAGATGAAGGGGTACCCTTTGTTGTTCTTGAAAGAGCAGATTGTATAGCCTCACTATGGCAAAGAAGAACCTATGATAGGTTGAAACTTCACCTTCCAAAGCAATTCTGCCAACTTCCTAAACTTCCATTCCCTGAAGATTTTCCTGAATACCCTTCAAAGAAACAGTTCATTGATTACCTTGAAACCTATGCAGAGAAATTTGAGATCAACCCACAGTTCAATGAGTGTGTGCAATCTGCTAGGTATGATGAGACTAGTGGGTTTTGGAGGGTTAAGACTGTTTCTTCCACAAGTAGAAATGAGGTTGAATATATTTGTAGGTGGCTTGTGGTTGCAACAGGTGAAAATGCTGAGTGTGTTAGACCTGATATTGAAGGACTAAGTGAGTTCAAAGGTGATATTGTTTATGCTAGTGATTATAAATCAGGTGAACCTTTTAAGGGTAAGAAAGTGCTTGTTGTTGGTTGTGGTAATTCTGGTATGGAGCTATCACTTGACCTTTGCAACCATCATGCTTCACCTTCCATGGTTGTTCGAAGCTCGGTTCATGTATTACCAAGAGAAATTTTCGGGCTATCAACATTTGAATTGGCAGTTTTGATGTTGAAATGGCTACCCCTTTGGTTAGTTGACAAGCTTCTATTGATCTTGACATGGTTTATTCTTGGTAACATAGAAAAGTATGGAATAAAGAGGCCTTCAAAGGGACCATTAGAGTTGAAGAACACAAAGGGAAAGACACCAGTTTTGGACATTGGTACCTTGGAAAAGATTAGATCTGGTGGTATCAACGTTGTACCAGGAATCAAGAGGTTTAATAATAGAGATGTTGAACTTGTTAATGGTGAAAAGCTTCATGTTGATGCAGTTGTTCTTGCAACTGGTTACCGCAGTAATGTCCCTTCTTGGCTTCAGGAATGTGAATTTTTCTCCAAGAATGGATACCCAAAAATGCCATTCCCACATGGTTGGAAAGGAAATTCAGGACTTTATGCAGTTGGGTTCACAAAGAGAGGGCTTTCTGGTGCTTCATCTGATGCTGTGAATATTGCTCAAGATATTAGCAAAGTGTGGAAACAAGAGACTAAACAAAAGAAACAAAGAACTATTGCTTGTCATAGACGTTGCATTTCACAATTCTAA 1266 0.3989 MENLFRLVDHEDFFSKRCIWVNGPVIVGAGPSGLATAACLRDEGVPFVVLERADCIASLWQRRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPSKKQFIDYLETYAEKFEINPQFNECVQSARYDETSGFWRVKTVSSTSRNEVEYICRWLVVATGENAECVRPDIEGLSEFKGDIVYASDYKSGEPFKGKKVLVVGCGNSGMELSLDLCNHHASPSMVVRSSVHVLPREIFGLSTFELAVLMLKWLPLWLVDKLLLILTWFILGNIEKYGIKRPSKGPLELKNTKGKTPVLDIGTLEKIRSGGINVVPGIKRFNNRDVELVNGEKLHVDAVVLATGYRSNVPSWLQECEFFSKNGYPKMPFPHGWKGNSGLYAVGFTKRGLSGASSDAVNIAQDISKVWKQETKQKKQRTIACHRRCISQF* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1225 421 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Lan5g1225 421 PRINTS Pyridine nucleotide disulphide reductase class-II signature 187 211 - -
Lan5g1225 421 Pfam Flavin-binding monooxygenase-like 26 342 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lan5g1225 421 Gene3D - 24 405 IPR036188 -
Lan5g1225 421 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 419 - -
Lan5g1225 421 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 10 419 - -
Lan5g1225 421 SUPERFAMILY FAD/NAD(P)-binding domain 188 399 IPR036188 -
Lan5g1225 421 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Lan5g1225 421 PRINTS FAD-dependent pyridine nucleotide reductase signature 191 209 - -
Lan5g1225 421 SUPERFAMILY FAD/NAD(P)-binding domain 25 296 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1225 Lan-Chr5 26111281 26113546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1225 K11816 - gmx:100819987 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0472 9 7029907 7032556 Lan5g1225 5 26111281 26113546 LSH
Lan5g1225 5 26111281 26113546 Lan19g0482 19 7060254 7062723 LSH
Lan20g0682 20 5421506 5431514 Lan5g1225 5 26111281 26113546 PCT