Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1208 ATGAATGGTTTTAGAGAAAAATGGTTTGAAAAAGTGAAACCATTTATAGCAGTGGTGTTCTTGCAATTTGGGTATGCTGGAATGGATGTTATATCAAAAGCTGCACTCAACAAAGGAATGAGCAATTATGTACTTGTTGTGTATAGACATGTTGTTGCCTTCATTGTTATAACCCCTTTTGCAATTATTCTAGACAAGAAAGTAAGAGTGAAGATGACATGTTCAATCTTCATGAAGATAGTGGCACTCAGCTTGCTAGAGCCAGTAATTGACCAGAATTTATATTTTTTGGGAATGAAATACACAACAGCAACATTTGCAGCAGCCATGTCCAATATGCTCCCTGCTATTACTTTCATCATGGCTTGCATTCTTAGGATTGAGAAGATAAACATAAAAAGTATACACAGTCAAGCCAAGATGGTTGGGACTATAGTCACTGTTGCAGGTGCTATGGTGATGACATTGTTAAAGGGTCCAATCCTTCAATTTTTAGGGACACATGGAAACAATAACCATAACCATCAAAATGGTGGGGCAAATAATCTTCAACATGTAATAAAGGGTTCAATAATGATCACAATTGGATGCTTTTGTTGGGCTGGTTTCATGGTTCTCCAATCTATTACCCTTGAAGCCTACCCTTCTGAGCTATCTCTTACAGCATGGATATGCTTATTGGGAACAGTTGAAGGTGGAATAGTGGCCCTAGTTATGGAGAGGGGTAACCCTTCTATTTGGTCTCTCACATGGGATACAAGACTTCTTGCTGCTATGTATAGTGGTGTAGTTTGTTCAGGACTGGCTTATTACATTCAAGGAGTAGTGATGAGAACAAGAGGCCCAGTTTTTGTTACAGCTTTCAGTCCTCTTTGCATGGTTATTGTTGCTATCTTGGGCTCCTTCATTTTGGCTGAGCAAATGTTCCTTGGAAGGGTTATTGGTGCCATTATCATTATTTTTGGGCTGTACCTAGTGGTGTGGGGTAAGAGCAAAGATTACAACTCACCAAGACCAATTAGCATAGAGCTTAGTCCAATTAATGAAGAGCATATATTACCAACAAAACAAGTTGTAGAAGAGGGCAATGTAATAAAGGAGCATTTTGATATCATAGTTAGAGATGAACAAGTATGA 1137 0.3852 MNGFREKWFEKVKPFIAVVFLQFGYAGMDVISKAALNKGMSNYVLVVYRHVVAFIVITPFAIILDKKVRVKMTCSIFMKIVALSLLEPVIDQNLYFLGMKYTTATFAAAMSNMLPAITFIMACILRIEKINIKSIHSQAKMVGTIVTVAGAMVMTLLKGPILQFLGTHGNNNHNHQNGGANNLQHVIKGSIMITIGCFCWAGFMVLQSITLEAYPSELSLTAWICLLGTVEGGIVALVMERGNPSIWSLTWDTRLLAAMYSGVVCSGLAYYIQGVVMRTRGPVFVTAFSPLCMVIVAILGSFILAEQMFLGRVIGAIIIIFGLYLVVWGKSKDYNSPRPISIELSPINEEHILPTKQVVEEGNVIKEHFDIIVRDEQV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1208 378 PANTHER WAT1-RELATED PROTEIN 9 341 - -
Lan5g1208 378 Pfam EamA-like transporter family 17 155 IPR000620 GO:0016020|GO:0016021
Lan5g1208 378 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Lan5g1208 378 PANTHER WAT1-RELATED PROTEIN 9 341 IPR030184 GO:0016021|GO:0022857
Lan5g1208 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 332 - -
Lan5g1208 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1208 Lan-Chr5 26002949 26007566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1208 5 377 Nodulin-like Gene Family AT2G37460 58.933 5.72e-160 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1208 - - gmx:100777050 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0456 9 6858633 6865121 Lan5g1208 5 26002949 26007566 LSH
Lan5g1208 5 26002949 26007566 Lan11g1386 11 21465733 21468260 PCT
Lan11g1386 11 21465733 21468260 Lan5g1208 5 26002949 26007566 PCT