Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1205 ATGGAGATGCAGAGAATTATGGAGTTTCCAGATAGGATTATGGACAAGAGACCAAGGAAGAAGCCTCGTTTAACATGGGATATGCATCCACCACCACAACCACAACCTCCAATTCCTCCTCCTAAGGTTCTTCCCACAACATATCACAACCAGGAGGTTGTGAATGGAGTGGCTCCAAATCATGCCTATCCTTCCTTGTTTTTTCGGGGATTGACTCGCAATGGATCACCCCCTTGGAGGCCTGATGATAAAGATGGTCACTATGTTTTTGCTGTCGGTGACAGTTTAACACCTCGATATAGAATTATCGGTAAAATGGGTGAAGGAACGTTTGGCCAAGTCTTGGAATGTTTTGACAATGAAAAGAAAGAAGCTGTTGCAATTAAAGTTGTTCGGTCCATAAACAAGTATCGTGAGGCTGCAATGATTGAAATTGATGTCTTGATGAGGCTAGCCAGACACGACATCAATGGTGCACGTTGTGTGCAAATTCGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTGTTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTCCGCAAAAACAGCTACCGTTCCTTTCCCATTGATCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATGACTTGTGCTTGATTCACACTGATTTGAAGCCAGAGAATATTCTTCTAGTCTCATCAGAGTTTATTAAAGTGCCTGATTACAAGTTTCTATCACGGGCCATGAAAGATGGCTCTTATTTCAAGAACCTACCCAAGTCTAGTGCCATTAAGCTCATTGATTTTGGGAGTACAACGTTTCAACATCAGGATCACAGTTATGTGGTATCAACAAGACACTATCGTGCACCAGAAGTTATCTTAGGTATTGGGTGGAACTACCCTTGTGATCTTTGGAGTGTAGGCTGCATACTGGTTGAGCTTTGCTCTGGTGAGGCACTTTTCCAGACACATGAGAACTTGGAACATCTTGCCATGATGGAAAGAGTTTTAGGGCCACTACCTCCCCATATGATTGTCAGGGCCGACCGACGAGCTGATAAGTATTTTAGAAGGGGCACACGGTTAGGTTGGCCCGATAGTTCAACTTCAAGAGAAAGCATGAGGGCAGTTTGGAAATTGCATCGTTTGCCGAACCTTATAATGCAGCACGTCGATCATTCTGCTGGTGATTTGATTGACCTCTTGCAAAGGCTCCTAAGGTATGACCCTGCAGAACGGATAAAAGCAAAGGAAGCATTAAGACACCCCTTCTTCTCAAGAGATCCTAAAAGGCATGGTTACCCTTTATAA 1320 0.4326 MEMQRIMEFPDRIMDKRPRKKPRLTWDMHPPPQPQPPIPPPKVLPTTYHNQEVVNGVAPNHAYPSLFFRGLTRNGSPPWRPDDKDGHYVFAVGDSLTPRYRIIGKMGEGTFGQVLECFDNEKKEAVAIKVVRSINKYREAAMIEIDVLMRLARHDINGARCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLVSSEFIKVPDYKFLSRAMKDGSYFKNLPKSSAIKLIDFGSTTFQHQDHSYVVSTRHYRAPEVILGIGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMIVRADRRADKYFRRGTRLGWPDSSTSRESMRAVWKLHRLPNLIMQHVDHSAGDLIDLLQRLLRYDPAERIKAKEALRHPFFSRDPKRHGYPL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1205 439 Gene3D Transferase(Phosphotransferase) domain 1 154 428 - -
Lan5g1205 439 SMART serkin_6 100 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g1205 439 CDD PKc_CLK 87 428 - -
Lan5g1205 439 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 431 - -
Lan5g1205 439 ProSiteProfiles Protein kinase domain profile. 100 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g1205 439 Gene3D Phosphorylase Kinase; domain 1 87 180 - -
Lan5g1205 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Lan5g1205 439 MobiDBLite consensus disorder prediction 1 36 - -
Lan5g1205 439 MobiDBLite consensus disorder prediction 1 26 - -
Lan5g1205 439 Pfam Protein kinase domain 100 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g1205 439 SUPERFAMILY Protein kinase-like (PK-like) 87 432 IPR011009 -
Lan5g1205 439 PANTHER BNAA07G37640D PROTEIN 2 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1205 Lan-Chr5 25979085 25984493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1205 91 434 Core Cell Cycle Gene Families AT1G76540 26.331 5.56e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lan5g1205 Pkinase 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1205 K08287 - gmx:100808061 793.882